Query= MSMg01no432_b11.b1 MSMg01no432_b11.b1 CHROMAT_FILE:
MSMg01no432_b11.b1 PHD_FILE: MSMg01no432_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:41 2005
(509 letters)
>mm_chr16_8057720_8058628
Length = 909
Score = 946 bits (489), Expect = 0.0
Identities = 501/505 (99%)
Strand = Plus / Plus
Query: 5 gaattccagaagacttatctcataaacagcgtgtttaatggctacctacctctataccag 64
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagaagactgagatcataaacagcgtgtttaatggctacctacctctataccag 264
Query: 65 ggaacaggaggaagccttggcctctccgccagtacttttgggctacgagagaaaaggcca 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaacagggggaagccttggcctctccgccagtacttttgggctacgagagaaaaggcca 324
Query: 125 gtcaccctacagcatcctatcattttaattattcatttcttctctgccccaagaattcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcaccctacagcatcctatcattttaattattcatttcttctctgccccaagaattcta 384
Query: 185 ttttcctgtggttttgaggtagtgtgcgttgggaatgtgcagagaagaccatgagttttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttcctgtggttttgaggtagtgtgcgttgggaatgtgcagagaagaccatgagttttg 444
Query: 245 tatgaaggagggataggcaaaccctcgggttcttctaacgctcgggcattccttattgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatgaaggagggataggcaaaccctcgggttcttctaacgctcgggcattccttattgct 504
Query: 305 cattccttgcacacacagctgccaagatggagtcaaggccttgagcctgtaaattttgta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattccttgcacacacagctgccaagatggagtcaaggccttgagcctgtaaattttgta 564
Query: 365 gaaagttgagcatgactccacttccctctttttatggaagcaaaggaaaagaagctcttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaaagttgagcatgactccacttccctctttttatggaagcaaaggaaaagaagctcttt 624
Query: 425 gacttatcaacactgttgatcatttctagacagaggcttgtttttggaaaaagttccaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacttatcaacactgttgatcatttctagacagaggcttgtttttggaaaaagttccaaa 684
Query: 485 attcaaaatcttagaaagcaaccca 509
|||||||||||||||||||||||||
Sbjct: 685 attcaaaatcttagaaagcaaccca 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_b11.g1 MSMg01no432_b11.g1 CHROMAT_FILE:
MSMg01no432_b11.g1 PHD_FILE: MSMg01no432_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:41 2005
(452 letters)
>mm_chr16_8207874_8208725
Length = 852
Score = 743 bits (384), Expect = 0.0
Identities = 384/384 (100%)
Strand = Plus / Minus
Query: 1 tattagtcaaaagttattcctctgggcattaactgccaccctaagcccaatccttttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tattagtcaaaagttattcctctgggcattaactgccaccctaagcccaatccttttggc 325
Query: 61 acagctacaaatcctaaactctcacaaatggcatccccttatccttatgcttctttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagctacaaatcctaaactctcacaaatggcatccccttatccttatgcttctttcttt 265
Query: 121 ctgtgtctccatgacagcaggacacacttgctttcttcttcctggctggttacattctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgtgtctccatgacagcaggacacacttgctttcttcttcctggctggttacattctgt 205
Query: 181 gtcctttggttcttttataatacaaggtctcactatgtgaccctggctagcctggaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtcctttggttcttttataatacaaggtctcactatgtgaccctggctagcctggaattt 145
Query: 241 tctatgtaggccaggctggctttgaagtgtggcaggtctcccatctctgcactgggttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tctatgtaggccaggctggctttgaagtgtggcaggtctcccatctctgcactgggttca 85
Query: 301 ggtatccaccaacatacctatatcttccaggctatttggctgatgtcttgcctactcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ggtatccaccaacatacctatatcttccaggctatttggctgatgtcttgcctactcctc 25
Query: 361 agcataaaaatattgttttcttag 384
||||||||||||||||||||||||
Sbjct: 24 agcataaaaatattgttttcttag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
