Query= MSMg01no433_n24.b1 MSMg01no433_n24.b1 CHROMAT_FILE:
MSMg01no433_n24.b1 PHD_FILE: MSMg01no433_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:05 2005
(239 letters)
>mm_chr16_35568871_35569509
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Plus
Query: 1 gagaagctgaactgtgggaacttcttgagcctgggacctcacctgtgaattactctatgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 gagaagctgaactgtgggaacttcttgagcctgggacctcacctgtgaattactctattt 260
Query: 61 gctttggctttaaggcattttgcatagaatcaagtttggggttctgtgtttgaaagcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttggctttaaggcattttgcatagaatcaagtttggggttctgtgtttgaaagcaca 320
Query: 121 cccagtgatagatgtccaatgggatctgtggttagcaggctctgggggacccctgaggaa 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccagtgatagatgcccaatgggatctgtggttagcaggctctgggggacccctgaggaa 380
Query: 181 ttattctttgcacactgttactctgtgtgcatgtgtgtaagcatgtgtgtatgtgtgtg 239
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattccttgcacactgttactctgtgtgcatgtgtgtaagcatgtgtgtatgtgtgtg 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_n24.g1 MSMg01no433_n24.g1 CHROMAT_FILE:
MSMg01no433_n24.g1 PHD_FILE: MSMg01no433_n24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:06 2005
(260 letters)
>mm_chr16_35737443_35738103
Length = 661
Score = 408 bits (211), Expect = e-118
Identities = 247/259 (95%), Gaps = 1/259 (0%)
Strand = Plus / Minus
Query: 1 acttctttcactcagaaaattatttctcttacacaagagatcttaatttttttttccatt 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 459 acttctttcactcagaaaattatttctcttacacaagagatcttttttttttttttcatt 400
Query: 61 tttgaacccggcagtatcaatggcatttggagatattttcccttcaagtaacctatgtaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tttgaacctggcagtatcaatggcatttggagatattttcccttcaagtaacctatgtaa 340
Query: 121 catccatggagagacaagtaggcctgccttgcacagttcacttcttgttcacttagcttc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 339 catccatggagagacaagtaggcctgccttgcacagttcacttcttattcacttagcttc 280
Query: 181 tgcctaggcccctgcctccagcctcgttattccttctttctgctttcgggaaataag-gg 239
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 279 tgcctgggcccctgcctccagcctcattattccttctttctgctttcgggaaataagatg 220
Query: 240 ggggggagagagagagaga 258
| | ||||||||||||||
Sbjct: 219 cgagagagagagagagaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 661
Length adjustment: 9
Effective length of query: 251
Effective length of database: 652
Effective search space: 163652
Effective search space used: 163652
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
