Query= MSMg01no434_a23.b1 MSMg01no434_a23.b1 CHROMAT_FILE:
MSMg01no434_a23.b1 PHD_FILE: MSMg01no434_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:20 2005
(483 letters)
>mm_chr16_35179588_35180470
Length = 883
Score = 880 bits (455), Expect = 0.0
Identities = 473/479 (98%)
Strand = Plus / Plus
Query: 5 gaattcaagacctctctataggctctaagggagcctttgtctgatagtagtgtctgatga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagacctctctataggctctaagggagcctttgtctgatagtagtgtctgatga 264
Query: 65 cagatgccaggatggacgtgtaaaccctgcctgttcagaaaccatgcatgtacatgggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagatgccaggatggacgtgtaaaccctgcctgttcagaaaccatgcatgtacatgggag 324
Query: 125 tgtggtccagtcacataggcttctcagctccctgtctcaatgcagcccatcttctctggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtggtccagtcacataggcttctcagctccctgtctcaatgcagcccatcttctctggg 384
Query: 185 gctggggcatcccatgtccctccacattacctgatactggtgttctcaagaacatagaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctggggcatcccatgtccctccacattacctgatactggtgttctcaagaacatagaac 444
Query: 245 aatggagtagccttccactgtagctgtctgagggctttcctgggtcttgacctttgtgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 aatggagtagccttccactgtagctgtctgagggctttcctgggtcttggcctttgtgtg 504
Query: 305 agcattagggacgatgctcttctctatacgcaaaacctttagggactgctacaagtacgg 364
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
Sbjct: 505 agcattagggacgatgctcttctctattcccaaaacctttagggactgctacaagtaccg 564
Query: 365 tctgtggctcatggtggccgggcctgctacctggggctgggcaacccatccttcccctct 424
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgtggcacatggtggccaggcctgctacctggggctgggcaacccatccttcccctct 624
Query: 425 tcagacgacagcgtgtccatctcttttttgaaggatgtgccatctgctttctggtccgc 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcagacgacagcgtgtccatctcttttttgaaggatgtgccatctgctttctggtccgc 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_a23.g1 MSMg01no434_a23.g1 CHROMAT_FILE:
MSMg01no434_a23.g1 PHD_FILE: MSMg01no434_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:21 2005
(425 letters)
>mm_chr16_35334672_35335490
Length = 819
Score = 737 bits (381), Expect = 0.0
Identities = 413/425 (97%), Gaps = 6/425 (1%)
Strand = Plus / Minus
Query: 1 tgatgctgtgggtccagcagtagctctagcttaggatatctgccctttaatatatactca 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 619 tgatgctgtgggtccagcagtagccctagcttaggatatctgccctttaatatatactca 560
Query: 61 ggatttagggtaatagtcttactttgaggtgggcttgcaacttgacctaccaaaaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggatttagggtaatagtcttactttgaggtgggcttgcaacttgacctaccaaaaggtag 500
Query: 121 actgttagaaattctatggactactgacttctagaagttctctctgaacttagactccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 actgttagaaattctatggactactgacttctagaagttctctctgaacttagactccat 440
Query: 181 tggcatgctgagtcagtacacaccagacactagaggcaagtgagaagaagccgggattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tggcatgctgagtcagtacacaccagacactagaggcaagtgagaagaagccgggattgt 380
Query: 241 tttaataaagaatgacttaaaactagagcttactttaaaattaacctttaaattatttta 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 tttaataaagaatgacttaaaactagagcttactttaaaattaaccttaaaattatttta 320
Query: 301 attcagaccaagtctacataatattttctatattcctcaagataaaatacagatggattt 360
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 319 attcagact--gtctacataatattttctatattcctcaagataaaatacagttggattt 262
Query: 361 ttttgtttgtttgttttgtgggggagagagaacctctaanattatatggttttcaagctt 420
||| ||||||||||||| ||||||||||||||||||||| | |||||||||||||| ||
Sbjct: 261 ttt-gtttgtttgttttatgggggagagagaacctctaa-a--atatggttttcaagttt 206
Query: 421 tcccc 425
|||||
Sbjct: 205 tcccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 819
Length adjustment: 9
Effective length of query: 416
Effective length of database: 810
Effective search space: 336960
Effective search space used: 336960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
