Query= MSMg01no435_d05.b1 MSMg01no435_d05.b1 CHROMAT_FILE:
MSMg01no435_d05.b1 PHD_FILE: MSMg01no435_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:50 2005
(253 letters)
>mm_chr16_29883428_29884080
Length = 653
Score = 480 bits (248), Expect = e-140
Identities = 251/252 (99%)
Strand = Plus / Minus
Query: 1 tagggttacagcccttgaagccagatggtttcctggagacgtcaggggagctgcgtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 452 tagggttacagcccttgaagccagatggtttcctggagacgtcaggggagctgggtgagg 393
Query: 61 tggcatgggggacaccatccgggagccccaagagctaaagctggcacttgcatgtggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tggcatgggggacaccatccgggagccccaagagctaaagctggcacttgcatgtggctg 333
Query: 121 gcatctgcttagtgctgtggatggtaccttcacagcatctccatctgcctccagcatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcatctgcttagtgctgtggatggtaccttcacagcatctccatctgcctccagcatccc 273
Query: 181 cagcctgggacctaagttgctgtattctattctccacccatttctgaaaactgcctgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cagcctgggacctaagttgctgtattctattctccacccatttctgaaaactgcctgctc 213
Query: 241 gggtgctacttc 252
||||||||||||
Sbjct: 212 gggtgctacttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no435_d05.g1 MSMg01no435_d05.g1 CHROMAT_FILE:
MSMg01no435_d05.g1 PHD_FILE: MSMg01no435_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:51 2005
(279 letters)
>mm_chr16_29714279_29714957
Length = 679
Score = 472 bits (244), Expect = e-137
Identities = 271/280 (96%), Gaps = 1/280 (0%)
Strand = Plus / Plus
Query: 1 tctaaggagataaaattctagttaagcctgaaatggcctcagcaagaatacaagatgcag 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctaaggagatcaaattctagttaagcctgaaatggcctcagcaagaatacaagatgcag 259
Query: 61 aaagctctgctcggtcttgccctgtcacacagttcattctagagcccccccccgcccc-c 119
||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
Sbjct: 260 aaagctctgctcggtcttgccctgtcacacagttcattctagagctcccccccaccccac 319
Query: 120 ccccgttccttctcagcccttctctaggcccatcagtatgccctgaggaggagacagtag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccccgttccttctcagcccttctctaggcccatcagtatgccctgaggaggagacagtag 379
Query: 180 ctcaggatctgagcacacagtaagtcaggactaggatggatggactgactggtcggagat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcaggatctgagcacacagtaagtcaggactaggatggatggactgactggtcggagat 439
Query: 240 ccaggtttgtgtttggagaacaaagctgtgacaggtgtgg 279
||||| | ||||||||||||||||| ||||||||||||
Sbjct: 440 ccaggccagagtttggagaacaaagctatgacaggtgtgg 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
