Query= MSMg01no436_f11.b1 MSMg01no436_f11.b1 CHROMAT_FILE:
MSMg01no436_f11.b1 PHD_FILE: MSMg01no436_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:23 2005
(320 letters)
>mm_chr16_34073584_34074304
Length = 721
Score = 569 bits (294), Expect = e-166
Identities = 316/326 (96%), Gaps = 6/326 (1%)
Strand = Plus / Minus
Query: 1 ggttggaagcagccacgtgggtgctgggagtcaagctctggtcctttaacagagcagcca 60
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 605 ggttggaagcagccacatgggtgctgggagtcaagctctggtccttaaacagagcagcca 546
Query: 61 gtgctc-----ttctctccagccctgacaacaaagttttgaaaagatagtataaatagta 115
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtgctcttagtttctctccagccctgacaacaaagttttgaaaagatagtataaatagta 486
Query: 116 gtcagaagaggacaaataaaaaccaaggtta-ttttttttcacccttatgctggcaggag 174
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 485 gtcagaagagggcaaataaaaaccaaggttatttttttttcacccttatgctggcaggag 426
Query: 175 tatgaattgaaatcattgctctgaaatgttttagagggccacttgacagaatatatacaa 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tatgaattgaaatcattgctctgaaatgttttagagggccacttgacagaatatatacaa 366
Query: 235 gctgggttagctcaaacatagaggactggatagcacagagcctgtgggtgggctcactcc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gctgggttagctcaaacatagaggactggatagcacagagcctgtgggtgggctcactcc 306
Query: 295 ccagggcaggtagaagggagggagag 320
||||||||||||||| ||||||||||
Sbjct: 305 ccagggcaggtagaaaggagggagag 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_f11.g1 MSMg01no436_f11.g1 CHROMAT_FILE:
MSMg01no436_f11.g1 PHD_FILE: MSMg01no436_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:23 2005
(570 letters)
>mm_chr16_33904603_33905572
Length = 970
Score = 1079 bits (558), Expect = 0.0
Identities = 567/570 (99%)
Strand = Plus / Plus
Query: 1 tgcatgtggtgtttcaagggagggggacccttagagctgtgagggtgattcgtactttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcatgtggtgtttcaagggagggggacccttagagctgtgagggtgattcgtactttcc 260
Query: 61 caaagtcagtggattctgaggaaagaggcccgtggggatgggatcagcatgagctctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagtcagtggattctgaggaaagaggcccgtggggatgggatcagcatgagctctgga 320
Query: 121 agcctgcctcagctacgagcatttgggctcggcttttggttccataactgaggtctgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcctgcctcagctacgagcatttgggctcggcttttggttccataactgaggtctgagc 380
Query: 181 taactcttcataattccttcctgccatctgaaacagtagaggagattctggtcccaggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taactcttcataattccttcctgccatctgaaacagtagaggagattctggtcccaggcg 440
Query: 241 ctctgtgttgagcaagagagaaccagctagccagaacaccagtgaggggtctatggccca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctgtggtgagcaagagagaaccagctagccagaacaccagtgaggggtctatggccca 500
Query: 301 cgtaaagcatagagtgccttttctctccttttcttttctttctttttttatttgtttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtaaagcatagagtgccttttctctccttttcttttctttctttttttatttgtttatt 560
Query: 361 ccatgtatgtgagtacactgtggctctcttcagacacaccagaagagggcatcagatccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatgtatgtgagtacactgtggctctcttcagacacaccagaagagggcatcagatccc 620
Query: 421 attgcagatggttgtgagccaccatgtggttgctaggaattgaactcgggacctctggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgcagatggttgtgagccaccatgtggttgctaggaattgaactcgggacctctggaa 680
Query: 481 gagcagtcagtcctcttaaccattgaaccatctctctaggccgagtttttcttattttaa 540
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 gagcagtcagtgctcttaaccattgaaccatctctctaggccgagcttttcttattttaa 740
Query: 541 agacttttaaattttaatttgtcgtgtgtg 570
||||||||||||||||||||||||||||||
Sbjct: 741 agacttttaaattttaatttgtcgtgtgtg 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
