TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTATTTATATGACTTCTCAAATTGTTAACGTTATAGCACTATGTTA
TTTTGTTTTCAGTTGGGTCAACATGATTGAAGATTCATTTCTCCTAAAAG
TATTAGGACATCTTTTACATATGATGGGACCACTATTTTATTACATTCAA
GAATTAGCTTACTAGCTTCAACTTTACTAAATATTTTATTATAAGATAAT
ATAGTTTGAATCTTTGATAACAAAAATCTGCGTGATGGAACTGAATATTC
TGTGTGGATATTATCAGCTCTAATAATACTTAGGTCTCTGCAGTTCTCTT
TCCATCAATAAAGCCAGGACAGCCACATGGAAATAAGTCTTTAGTCGTTA
TGAGAGAACTATAAATAAGTGCTTCAAACAAATTTATCTTTATAAAACAA
ATCTCTGTCCCCTCACCACCAAAACCAATGTCTTATTCTGTATTTTTGGT
AGATTTCTTTTGAGTGTTTTGTTTTCAGGCTGGTTGATCTTAACCTGGGT
TGCAGATAAATGAATGTATAAACCACCGGATGAACACGGGATGCTGACAA
TACATGGTCTGGTTTCTGGTCTCATCTTATCTGATACAGATTCCCTTAAT
AATATTTAATTCTTCTACCAGGCCAAGGAAGCATTTGGAAAATATAATGG
GCACAGTGCATTACTTCAATTTGATTTCAGCTGGCTGGCCTTCTGTGTCA
TC

TGGCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGATCAAAAATTCACGTGACAGCAGATGCTGGCGTGGATGTGGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGAGCGCAGGCTTGTACAACCACTC
TGGAAATCCGTCTGGTGGTTCCTCAGAAAATTGGACATAGTATTACCGGA
GGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTG
GTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACA
GAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACACATTCACAAAGAAACTCACACCATATGTACTCACT
GATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATAAGATATAAA
TTTGCTAAACCCATGAAACTCTAGAAGAAGGAAA

Query= MSMg01no437_k15.b1 MSMg01no437_k15.b1 CHROMAT_FILE:
MSMg01no437_k15.b1 PHD_FILE: MSMg01no437_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:07 2005
         (644 letters)



>mm_chr16_53541821_53542865
          Length = 1045

 Score = 1191 bits (616), Expect = 0.0
 Identities = 638/646 (98%), Gaps = 3/646 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattgttaacgttatagcactatgttattttgttttcagttgggtcaacatgattgaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aattgttaacgttatagcactatgttattttgttttcagttgggtcaacatgattgaaga 786

                                                                       
Query: 61  ttcatttctcctaaaagtattaggacatcttttacatatgatgggaccactattttatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttcatttctcctaaaagtattaggacatcttttacatatgatgggaccactattttatta 726

                                                                       
Query: 121 cattcaagaattagcttactagcttcaactttactaaatattttattataagataatata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cattcaagaattagcttactagcttcaactttactaaatattttattataagataatata 666

                                                                       
Query: 181 gtttgaatctttgataacaaaaatc--tgcgtgatggaactgaatattctgtgtggatat 238
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 665 gtttgaatctttgataacaaaaatctgtgcgtgatggaactgaatattctgtgtggatat 606

                                                                       
Query: 239 tatcagctctaataatacttaggtctctgcagttctctttccatcaataaagccaggaca 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tatcagctctaataatacttaggtctctgcagttctctttccatcaataaagccaggaca 546

                                                                       
Query: 299 gccacatggaaataagtctttagtcgttatgagagaactataaataagtgcttcaaacaa 358
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 545 gccacatggaaataagtctttagtcgttatgagagaactataaataagtacttcaaacaa 486

                                                                       
Query: 359 atttatctttataaaacaaatctctgtcccctcaccaccaaaaccaatgtcttattctgt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atttatctttataaaacaaatctctgtcccctcaccaccaaaaccaatgtcttattctgt 426

                                                                       
Query: 419 atttttggtagatttcttttgagtgttttgttttcaggctggttgatcttaacctgggtt 478
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 425 atttttggtagatttcttttgagtgttt-gttttcaggctggttgatcttaacctgggtt 367

                                                                       
Query: 479 gcagataaatgaatgtataaaccaccggatgaacacgggatgctgacaatacatggtctg 538
           |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcagataaataaatgtacaaaccaccggatgaacacgggatgctgacaatacatggtctg 307

                                                                       
Query: 539 gtttctggtctcatcttatctgatacagattcccttaataatatttaattcttctaccag 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtttctggtctcatcttatctgatacagattcccttaataatatttaattcttctaccag 247

                                                         
Query: 599 gccaaggaagcatttggaaaatataatgggcacagtgcattacttc 644
           |||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 246 gccaaggaagcacttggaaaatataataggcacagtgcattacttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space:   656190
Effective search space used:   656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)