NNNGGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCTGTTCTGAGCCCCATTTTTAATGGGGTTATTTG
ATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGT
CCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGG
TCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTT
TCATTAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCT
GTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCC
CACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCT
TGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCTATT
CGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAA
AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCA
AGTGACCATAGGGTGTGTGGGTTCATTTCTGGATCTTCCATTTTATTTCC
ATTGGGCTACTTGTCTGGCCCTAAACCACANCCATGCTGGTTTTTTTACC
ATTGCTCCTTTATAAAATTTTATTTCTGGCTTGTTGATTTCCCCCCAAAA
TTTTTTTTTCTTTGTAAAAAATTTTTGTTTCTTCTAACTCTTTGTATTTT
CGATACAAATTTGAATCTTCCCTCCCTC

NNNNCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCTTACAATCATTTAA
ATATTTAAGCACTTGTATTTAAATACTTTCTAGGGTCAAGTTGTACTGAT
AAGAATCAAACAATACAGAACGACAGTTCATCTCCTCTGACACAAGGTAA
TATTCTTGCTTATTATGTGGGAATGGAGAGTTGACCTTGCTTAGAAACAG
TAACTAATGCCTTGGCTGCTGGACAGATTTAGGACGAGTAGCAGAGTCTG
GTGATGTAGTGCTATGGTGTGAGGGACCCTGAACCCTTGCCTCTAAACCT
TTACCACCTCAGAGTGAGTGATGAAAAGACTGTGGTAGGTCTGTGTTAAG
AATTTCTTTCTTGGATTAGTTGAGCTTTATTTGGATTTGACTTGTGAGGA
CTTGAGTTCCCCAAAGAGACAAGTGATATTGAAATCAGGAAGTAGAGATG
TTAATGCAGTGTTTATCAGAAGCATGGTTTATTCCCATCAAGTTCTGCTC
CTGTTAAAGCGATGACATTGGCTGATTTTTGTCACAAGTGATAGTGACAG
GGAATTTTTGTTGAGAAATCCCTACTCAGCACACTTGTTTCCTTCAGGGA
TGATTTAAACCCCGGGCTAAACCAAGGGGAGAATTTTTGGGGGGAGAAAA
GGGTAATCCCACTTGCCTGAAACTTTTTTTTTAAAAAAAGAAAACAATAT
TTTATTTTTGAACCTTTTGAATTATAGAATAAAATA

Query= MSMg01no440_p17.g1 MSMg01no440_p17.g1 CHROMAT_FILE:
MSMg01no440_p17.g1 PHD_FILE: MSMg01no440_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:36 2005
         (478 letters)



>mm_chr16_44788608_44789485
          Length = 878

 Score =  569 bits (294), Expect = e-166
 Identities = 438/496 (88%), Gaps = 26/496 (5%)
 Strand = Plus / Plus

                                                                       
Query: 4   cttacaatcatttaaatatttaagcacttgtatttaaatactttctagggtcaagttgta 63
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 cttacaatcatttaaatatttaagcacttgtatttaaatattttctagggtcaagttgta 263

                                                                       
Query: 64  ctgataagaatcaaacaatacagaacgacagttcatctcctctgacacaaggtaatattc 123
           |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 ctgataagaatcaaacaacacagaacaacagttcatctcctctgacacaaggtaatattc 323

                                                                       
Query: 124 ttgcttat-tatgtgggaatggagagttgaccttgcttagaaacagtaactaatgccttg 182
           |||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 324 ttgcttatct-tgtgggaatggagagttgaccttgcttagacacagtaactaatgccttg 382

                                                                       
Query: 183 gctgctggacagatttaggacgagtagcagagtctggtgatgtagtgcta-tggtgtgag 241
           ||||||||||||||| |||| | ||||| |||||||||||||||||| || |||||||||
Sbjct: 383 gctgctggacagattcaggatgcgtagccgagtctggtgatgtagtg-taatggtgtgag 441

                                                                       
Query: 242 ggaccctgaacccttgcctctaaacctttaccacctcagagtgagtgatgaaaagactgt 301
           ||||||||||| ||||||||||||||||||||| || ||||||| ||||| |||||||||
Sbjct: 442 ggaccctgaacacttgcctctaaacctttaccatcttagagtgaatgatggaaagactgt 501

                                                                       
Query: 302 gg---ta-----------ggtctgtgtt-aagaatttctttcttg----gattagttgag 342
           ||   ||           |||||||||| ||||| |||||| ||     |||||| ||| 
Sbjct: 502 ggcattatcaccctcccaggtctgtgttgaagaacttctttattcatctgattaggtgac 561

                                                                       
Query: 343 ctttatttggatttgacttgtgaggacttgagttccccaaagagacaagtgatattgaaa 402
           | | |||||||| ||||||||||||||||||||||| ||||||| |||| || || || |
Sbjct: 562 catgatttggatgtgacttgtgaggacttgagttccacaaagagccaagcgacatagata 621

                                                                       
Query: 403 tcagga-agtagagatgttaatgcagtgtttatcagaagcatggtttattcccatcaagt 461
           | |||| |||||||||||||||||| ||||||||| ||||| || |||| ||||||||||
Sbjct: 622 t-aggatagtagagatgttaatgcaatgtttatcataagcacggcttat-cccatcaagt 679

                           
Query: 462 tctgctcctgttaaag 477
           ||| ||||||||||||
Sbjct: 680 tctcctcctgttaaag 695


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space:   406224
Effective search space used:   406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)