Query= MSMg01no446_m22.b1 MSMg01no446_m22.b1 CHROMAT_FILE:
MSMg01no446_m22.b1 PHD_FILE: MSMg01no446_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:26 2005
(616 letters)
>mm_chr16_55269135_55270150
Length = 1016
Score = 1114 bits (576), Expect = 0.0
Identities = 606/616 (98%)
Strand = Plus / Minus
Query: 1 attcatgatgattttgcatctttagtctccagatttctaggattatacatgtacagtgcc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 attcatgatgattttgcctctttagtctccagatttctaggattatacatgtacagtgcc 757
Query: 61 acaggttttggctattatgactaaagcagtgtgtggtgaccctggactgtgatctcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 acaggttttggctattatgactaaagcagtgtgtggtgaccctggactgtgatctcaaag 697
Query: 121 ctttctgtgtgttcagaatctagagataataaggtcttaaggttagcatcttggttttga 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 696 ctttctgtgtgttcagaatctagagataataaggtcttaagattagcatcttggttttga 637
Query: 181 aacgacaaatctaacaaatggctgataagaacctgaatccatatttgctaacataaaaag 240
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 636 aatgacaaatctaacaaatggctgagaagaacctgaatccatatttgctaacataaaaag 577
Query: 241 taaataagctgccttcccacttctgcctccttgctctcttctggacaatctcagatttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 taaataagctgccttcccacttctgcctccttgctctcttctggacaatctcagatttga 517
Query: 301 tgtgtagttgaaaggcaaacattttactactgtccttggtagactgactcaattagctag 360
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 516 tgtgtagttgaaaggcaaacattttactactgtccttggtagactgattcaactagctaa 457
Query: 361 agtattcatccattttgaaaacacagactatctcatattatatttttttccatagtgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agtattcatccattttgaaaacacagactatctcatattatatttttttccatagtgaga 397
Query: 421 ggagggagcctccctcaaaaagcacatatctgttttcaaacttgtatcagtagggcaaaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 396 ggagggagcctccctcaaaaagcacatatctgttttcaaacttgtatcagtaggacaaaa 337
Query: 481 tttattaatccacagaagggaaggcctgttaaatattacaaactctgaaaatgcaaagga 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 336 tttattaatccacagaagggaaggcctgttaaatattacaaactctgaaaatgcaaagaa 277
Query: 541 aacagccaacgattctgaagggaaatgagaatgacacctaacttactcagtaactgttga 600
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aacagccaacgattccgaagggaaatgagaatgacacctaacttactcagtaactgttga 217
Query: 601 gactcacatagctcat 616
||||||||||||||||
Sbjct: 216 gactcacatagctcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_m22.g1 MSMg01no446_m22.g1 CHROMAT_FILE:
MSMg01no446_m22.g1 PHD_FILE: MSMg01no446_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:26 2005
(245 letters)
>mm_chr16_55079890_55080534
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 240/245 (97%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 ttacttcctgcccataaaaactataagacataaacatgtattgtttaagttcgctaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 202 ttacttcctgcccataaaaactataagacataaacatgtattgtttaagtt-gctaagtt 260
Query: 61 tgtattggtttgctacagagcaataggaataatcaaggggagggggaaatggtgaaagta 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tgtattggtttgctacagagcaataggaagaatcaaggggagggggaaatggtgaaagta 320
Query: 121 gggataattgaggagttgaataatgtcagtgactgtcctatatatcacataactgttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggataattgaggagttgaataatgtcagtgactgtcctatatatcacataactgttctt 380
Query: 181 ttttttcgctactcttcatgggtctgatagcaaagaaggatgtagccacagagtggcgaa 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttaacgctactcttcatgggtctgatagcaaagaaggatgtagccacagagtggcgaa 440
Query: 241 gagtg 245
|||||
Sbjct: 441 gagtg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
