MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-446O01
Chromosome	16 (Build37)
Map Location	57,893,775 - 57,894,191
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480
Downstream gene	LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668026 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668026
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC668036 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	2310005G13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69457 MGI:1916707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tomm70a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28185 MGI:106295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nit2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52633 MGI:1261838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67581 MGI:1914831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem30c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71027 MGI:1918277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 Proteins

name	2610528E23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66497 MGI:1913747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4631422O05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78749 MGI:1925999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col8a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12837 MGI:88463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435480 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC629342 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100043477 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043477
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins

name	Dcbld2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73379 MGI:1920629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St3gal6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54613 MGI:1888707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043480 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Gm813 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328695 MGI:2685659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E330017A01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224247 MGI:3045360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpox (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12892 MGI:104841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043790 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gpr15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71223 MGI:1918473
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 3 ESTs, 3 Proteins

name	Cldnd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224250 MGI:2447860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr172 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259003 MGI:3030006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr173 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259002 MGI:3030007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr174 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259004 MGI:3030008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258999 MGI:3030012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310005G13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34304080 GeneID:69457 MGI:1916707
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310005G13 gene transcript_id : NM_183281.1

name	Tomm70a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382801 GeneID:28185 MGI:106295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of outer mitochondrial membrane 70 homolog A (yeast) transcript_id : NM_138599.3

name	Nit2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963554 GeneID:52633 MGI:1261838
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nitrilase family, member 2 transcript_id : NM_023175.1

name	Tbc1d23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754078 GeneID:67581 MGI:1914831
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 23 transcript_id : NM_026254.2

name	Tmem30c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267556 GeneID:71027 MGI:1918277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 Proteins product : transmembrane protein 30C transcript_id : XM_001481138.1

name	2610528E23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381765 GeneID:66497 MGI:1913747
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610528E23 gene transcript_id : NM_025599.2

name	4631422O05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144226249 GeneID:78749 MGI:1925999
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4631422O05 gene transcript_id : NM_001040397.2

name	Col8a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681715 GeneID:12837 MGI:88463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type VIII, alpha 1 transcript_id : NM_007739.2

name	LOC435480 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267463 GeneID:435480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001480249.1

name	LOC100043477 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267465 GeneID:100043477
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins product : similar to CG2839-PA transcript_id : XM_001480251.1

name	Dcbld2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579946 GeneID:73379 MGI:1920629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : discoidin, CUB and LCCL domain containing 2 transcript_id : NM_028523.3

name	St3gal6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130739 GeneID:54613 MGI:1888707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST3 beta-galactoside alpha-2,3-sialyltransferase 6 transcript_id : NM_018784.2

name	Gm813 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803319 GeneID:328695 MGI:2685659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 813, (NCBI) transcript_id : NM_001033404.2

name	E330017A01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802016 GeneID:224247 MGI:3045360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330017A01 gene transcript_id : NM_175011.2

name	Cpox (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681006 GeneID:12892 MGI:104841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coproporphyrinogen oxidase transcript_id : NM_007757.1

name	LOC100043790 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267558 GeneID:100043790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043790 transcript_id : XM_001481144.1

name	Gpr15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267560 GeneID:71223 MGI:1918473
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 3 ESTs, 3 Proteins product : G protein-coupled receptor 15 transcript_id : XM_156321.5

name	Cldnd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892263 GeneID:224250 MGI:2447860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin domain containing 1 transcript_id : NM_171826.2

name	Olfr172 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128934 GeneID:259003 MGI:3030006
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 172 transcript_id : NM_147001.1

name	Olfr173 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128938 GeneID:259002 MGI:3030007
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 173 transcript_id : NM_147000.1

name	Olfr174 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583640 GeneID:259004 MGI:3030008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 174 transcript_id : NM_147002.2

name	Olfr178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128946 GeneID:258999 MGI:3030012
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 178 transcript_id : NM_146997.1

name	2310005G13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304081 GeneID:69457 MGI:1916707
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC69457 protein_id : NP_899104.1

name	Tomm70a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27552760 CCDS:CCDS28227.1 GeneID:28185 MGI:106295
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : translocase of outer mitochondrial membrane 70 homolog A protein_id : NP_613065.2

name	Nit2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963555 GeneID:52633 MGI:1261838
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : Nit protein 2 protein_id : NP_075664.1

name	Tbc1d23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754079 CCDS:CCDS28228.1 GeneID:67581 MGI:1914831
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : TBC1 domain family, member 23 protein_id : NP_080530.2

name	Tmem30c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267557 GeneID:71027 MGI:1918277
definition	codon_start : 1 product : hypothetical protein LOC71027 protein_id : XP_001481188.1

name	2610528E23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735423 GeneID:66497 MGI:1913747
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66497 protein_id : NP_079875.1

name	4631422O05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94536719 GeneID:78749 MGI:1925999
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC78749 protein_id : NP_001035487.1

name	Col8a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681716 GeneID:12837 MGI:88463
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0050673 - epithelial cell proliferation [Evidence IGI]; GO:0048595 - eye morphogenesis (sensu Mammalia) [Evidence IGI]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : procollagen, type VIII, alpha 1 protein_id : NP_031765.2

name	LOC435480 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267464 GeneID:435480
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001480299.1

name	LOC100043477 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267466 GeneID:100043477
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480301.1

name	Dcbld2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27476057 CCDS:CCDS28229.1 GeneID:73379 MGI:1920629
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0030522 - intracellular receptor-mediated signaling pathway [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0042060 - wound healing [Evidence ISS] codon_start : 1 note : endothelial and smooth muscle cell-derived neuropilin-like product : discoidin, CUB and LCCL domain containing 2 protein_id : NP_082799.2

name	St3gal6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055352 CCDS:CCDS28230.1 GeneID:54613 MGI:1888707
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008373 - sialyltransferase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 note : alpha-2,3-sialyltransferase VI; ST3Gal VI; sialyltransferase 10 (alpha-2,3-sialyltransferase VI) product : alpha2,3-sialyltransferase VI protein_id : NP_061254.1

name	Gm813 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701901 CCDS:CCDS28231.1 GeneID:328695 MGI:2685659
definition	GO_function : GO:0008199 - ferric iron binding [Evidence IEA] GO_process : GO:0006879 - iron ion homeostasis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC328695 protein_id : NP_001028576.1

name	E330017A01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239383 CCDS:CCDS28232.1 GeneID:224247 MGI:3045360
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008199 - ferric iron binding [Evidence IEA] GO_process : GO:0006879 - iron ion homeostasis [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC224247 protein_id : NP_778176.1

name	Cpox (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681007 GeneID:12892 MGI:104841
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006783 - heme biosynthesis [Evidence IEA]; GO:0006779 - porphyrin biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : coproporphyrinogen oxidase protein_id : NP_031783.1

name	LOC100043790 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267559 GeneID:100043790
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481194.1

name	Gpr15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20894484 GeneID:71223 MGI:1918473
definition	codon_start : 1 product : G protein-coupled receptor 15 protein_id : XP_156321.1

name	Cldnd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25188197 CCDS:CCDS28234.1 GeneID:224250 MGI:2447860
definition	codon_start : 1 product : claudin containing domain 1 protein_id : NP_741968.1

name	Olfr172 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128935 CCDS:CCDS28235.1 GeneID:259003 MGI:3030006
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x54KRFPKG5P-54930346-54929417; olfactory receptor MOR184-2 product : olfactory receptor 172 protein_id : NP_667212.1

name	Olfr173 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128939 CCDS:CCDS28236.1 GeneID:259002 MGI:3030007
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x54KRFPKG5P-54960233-54959268; olfactory receptor MOR184-3 product : olfactory receptor 173 protein_id : NP_667211.1

name	Olfr174 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583641 CCDS:CCDS28237.1 GeneID:259004 MGI:3030008
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x54KRFPKG5P-54993816-54992890; olfactory receptor MOR184-1 product : olfactory receptor 174 protein_id : NP_667213.2

name	Olfr178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128947 CCDS:CCDS28238.1 GeneID:258999 MGI:3030012
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x54KRFPKG5P-55108059-55107100; olfactory receptor MOR184-6 product : olfactory receptor 178 protein_id : NP_667208.1

name	LOC668026 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668026
definition	number : 1 pseudo : _no_value

name	LOC668026 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668026
definition	number : 2 pseudo : _no_value

name	LOC668036 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668036
definition	number : 1 pseudo : _no_value

name	LOC668036 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668036
definition	number : 2 pseudo : _no_value

name	LOC629342 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629342
definition	number : 1 pseudo : _no_value

name	LOC100043480 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043480
definition	number : 1 pseudo : _no_value

clone name	MSMg01-157O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-516K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-198D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-300K19
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-258L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088D01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-446O01.T7 (MSMg01no446_o01.b1)	MSMg01-446O01.TJ (MSMg01no446_o01.g1)
ACC	AG535468	AG535469
length	895	734
length of high quality (start - end)	---	417 (69 - 485)
definition	CHROMAT_FILE: MSMg01no446_o01.b1 PHD_FILE: MSMg01no446_o01.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:15:32 2005	CHROMAT_FILE: MSMg01no446_o01.g1 PHD_FILE: MSMg01no446_o01.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:15:32 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NAATAGGAGAGGAGGAGAGGGGGGGATGTCCNNNNCAGGGAGAGGGGGGG GAGGATAAAATTGGGGGGGGGTTGGAGTGNTGGGGAGGAGTGGTGGTGAA TGTAATAAGAATTGCAGGCCCGCCCTAAAAACGAACCTCCAACNTAANAT GGCAGNNGAAGGNAGAAGGGGGNGNNGGNNNAAAANNNNCATATTTGGGG GTTGGACAAAAAAGAGAAGGGAGGAAAAAAANNTNAAAAAAGGGGAAGGG GGAAAGGGGTAAGGGAAAAAGAAAAAAAAGGNGGGTTTATTAAAAGCCGG GAAGAAGAAGAAATATTATATTAAGATAAAGAGGGAAAGAGGGAGAGGGA AGGGGAGTGGAAGAAAGGATGTAAGAGTGGGAGGGGGGGGGAGATAGAAA GTGAAGGGGGGGAAGAGAGAGAAAAAAAGAGAATAAAGGTTATAAAAAGT GAAAAAAGGGGATGAGGAAGAAAGTTGGGAGAGGGGATCAGTAAAGAAAG GGGAGGGGGAGAGGGGGGAAGAGGTGGAGAGGAGGAGAGAAAGGGATGGA GGGAAGGGGGATTTTTTTTTTTTTTATGGAGAAGAGGTAAGGGAGAAGAG AATGTGAGAAAGGAGGGAGGGTTGTGTTAAAGGGAAAAAGATTGAGGTGG GGAGAGGAGGGTGAAGGGGAGGGGGAGGCGAGGTTGACGGGTTAGAAGGT TGGGATGGGGAGAGGGGGGATGAGGAAGAGTGGATGGGAGGATAGTGGGG TTCGAGAGGAAATGAACGGAGGAAAGGTTTTTTATTGTTTGTTTTATTTT TTTATATAAAGCAGAAAGGAGACCGGAAGATAAGAGAACGGTGGATGTGG ATNTAGATAAAATAAGTAGAAGAAGGTAATATGAGCGGAAGTAGG	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXACAGTTACTCCTGTAATTTTGAGACGTTTTCC ACAACTTGATGAATTTTTCTTTTTCTACCAGGTAAGTATAGAGAATTTGA ACTCTCTTAGAAAAATCCACCTACATGAACACTTCTCAAAGAAGTTGGAA GCTCCTGAAGAGGTCAATGAACATTCTGTGCAAGGAACAGAAAATGCCTA CTGCCAACCGAAGGTAGAGCCTGGAGGCAGTGCCTGGCCACTGCTGGCTC CATCTGCTTGTGTGCCTGCTGTTTAGTTTGGCAAAGGCTGGCTCCTTTGC AGGAGGGAAATGGTTTCTACATTGGGCTGCAGAGTCGGAGGATGTGGACT CAGAAGGAGAACTGGGTTGTTCTGGCTAAATACATTTGCTTTATTTCCGT GGGACCTCCCCAAACACATTGATATTTTTATAAGAATGAAATTAAGGCAG TAGTGACAAAGACAACATTATCACTGCTTGCCCGGGTTGGTATACTGTGC AGTGTTTATTTGTCAATGAAAACCAATATGTCCCCGGAAGTCATTTTCCC CATCTCCCCGATACCGATCCCTCTCTTTCTATTCCTTACTAGCGTGGGTA CTGCTTTTTACCCCTTCCCCCTACTATTACCCATCTTTTCCTTATGATTC TCGGCCGCTTCCCTTCGACCTATTTTGTTTGTCC
quality values	Open. Hide. 0 3 7 6 6 6 6 7 7 9 11 11 17 13 13 10 10 10 15 19 19 11 12 9 9 9 7 6 6 11 3 0 0 0 0 3 7 11 8 9 6 7 6 9 10 12 19 16 10 13 13 8 8 8 8 8 8 9 10 10 9 9 10 15 13 12 12 17 10 8 8 8 8 9 11 14 11 14 3 0 3 9 9 9 9 9 8 8 8 8 8 8 8 6 6 8 10 19 9 9 6 6 6 6 6 6 6 6 6 6 8 13 10 6 6 6 6 6 6 9 9 9 9 9 9 9 14 15 12 7 6 6 6 7 6 9 9 10 10 9 9 9 3 0 3 7 3 0 3 7 9 9 9 9 3 0 0 3 6 6 6 3 0 3 6 6 6 6 6 6 9 3 0 3 0 0 3 3 0 0 0 3 13 13 3 0 0 0 0 3 6 6 6 6 6 8 8 8 7 6 6 8 6 6 6 6 7 7 9 11 7 7 6 6 6 6 9 10 8 7 6 6 6 7 8 8 8 18 16 15 3 0 0 3 0 3 18 21 17 10 8 8 8 8 11 9 10 9 15 15 13 8 8 8 8 8 7 7 6 6 6 6 9 13 12 16 16 18 12 9 9 9 13 13 30 21 11 8 8 8 3 0 3 8 10 9 6 8 6 6 7 7 12 12 23 19 10 8 8 8 8 8 12 8 8 8 8 8 9 13 8 8 8 12 12 8 8 8 10 8 9 12 11 8 8 6 6 6 8 8 6 6 8 6 9 10 10 8 8 8 6 8 6 6 8 8 12 10 12 10 10 10 10 12 10 8 6 8 8 10 23 21 19 15 11 10 9 8 8 8 10 8 10 10 10 8 8 8 8 8 8 6 6 8 8 10 10 16 9 9 8 8 8 6 6 6 6 7 11 8 7 7 10 19 19 15 9 10 9 6 8 7 8 10 6 6 10 8 8 10 15 15 15 15 19 22 10 8 10 10 8 8 8 8 8 11 8 8 8 8 8 8 7 6 8 8 17 11 11 10 10 11 12 15 11 14 7 9 10 8 11 9 9 9 12 12 10 9 12 12 9 8 8 6 6 6 6 10 8 8 6 7 7 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 10 10 8 9 9 10 9 8 8 8 8 10 8 9 8 19 11 12 7 7 8 8 8 8 8 8 8 8 10 7 6 8 8 14 16 10 10 10 8 8 8 10 11 19 17 12 9 9 9 11 10 8 8 8 8 7 7 12 15 10 10 11 10 10 10 13 19 15 17 19 19 12 9 8 8 8 8 8 8 8 8 8 8 8 6 6 7 8 6 8 9 11 9 11 11 18 15 14 12 12 7 7 8 8 8 8 8 8 8 8 8 6 6 15 6 9 10 12 10 8 8 8 8 8 8 8 8 8 8 8 15 15 24 15 21 12 12 11 11 15 8 8 8 8 8 10 8 9 9 9 12 9 12 12 12 12 8 6 6 6 6 6 8 9 9 9 9 9 7 8 6 6 8 8 8 9 6 10 6 9 9 9 10 9 8 8 10 8 8 8 10 10 10 10 13 11 13 12 11 11 10 11 9 8 6 6 6 8 10 11 8 10 8 8 8 8 9 15 9 8 8 8 6 7 8 6 6 10 10 12 6 6 8 8 10 11 9 10 8 8 8 6 6 6 8 8 8 8 8 9 12 11 12 10 10 7 6 9 9 12 7 8 8 8 8 8 8 8 8 12 13 9 9 11 19 17 14 12 12 8 9 10 8 8 8 8 6 6 6 7 6 6 6 15 15 7 7 7 11 8 19 7 10 7 6 7 8 10 8 8 8 6 6 6 6 8 10 9 9 9 9 10 6 6 8 6 8 8 9 11 10 13 8 8 8 8 15 13 8 8 8 8 8 8 10 8 6 6 6 6 8 6 3 0 3 6 8 12 9 7 13 8 9 12 10 10 6 6 6 6 9 9 9 9 9 14 9 9 8 8 8 8 13 9 7 8 6 6 10 10 8 8 8 8 8 8	Open. Hide. 11 11 11 11 9 13 13 18 22 43 44 43 43 41 39 39 39 39 39 44 25 23 12 9 6 6 6 6 6 8 13 10 16 16 29 23 39 32 37 44 39 47 47 47 37 44 39 50 47 43 27 20 11 6 6 6 6 6 8 13 15 26 19 30 30 30 33 36 47 47 50 50 53 57 57 57 59 59 59 59 59 57 57 57 57 53 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 50 50 68 68 48 57 47 47 47 57 57 57 57 57 57 57 57 68 68 68 68 68 68 51 51 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 68 59 50 48 46 46 46 46 57 57 59 59 59 59 57 57 57 57 57 57 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 57 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 52 52 52 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 59 59 52 52 52 52 59 59 57 57 57 57 57 68 68 68 59 59 59 59 57 68 68 68 68 68 68 68 68 68 59 59 44 38 32 18 18 18 34 36 32 59 59 57 57 59 59 59 59 59 57 68 68 68 57 57 59 59 54 54 54 57 52 59 52 57 57 59 59 59 59 52 52 52 52 52 52 57 57 50 59 50 50 50 50 59 59 59 59 59 59 54 54 54 59 59 57 57 57 48 44 44 44 44 48 57 57 48 47 47 44 44 47 43 42 42 37 37 39 47 59 59 48 48 43 44 43 43 43 44 44 37 37 37 37 28 30 20 28 28 43 41 59 43 43 43 43 47 48 59 57 48 43 43 40 40 40 43 47 48 48 48 48 48 48 41 41 37 37 37 37 33 28 22 28 28 28 28 37 37 29 27 18 18 19 24 29 37 36 30 30 33 33 36 37 37 47 37 37 40 37 37 33 30 28 23 18 22 28 28 22 18 17 15 15 14 14 15 15 14 14 14 19 24 23 23 18 21 12 12 12 21 22 22 14 14 14 24 24 35 34 34 28 23 23 23 30 21 23 18 17 18 18 18 13 13 9 9 10 15 8 8 8 8 8 13 18 21 15 11 11 12 12 11 11 11 17 17 8 8 9 8 13 8 8 8 10 12 10 10 8 8 8 8 11 10 8 9 10 10 10 8 9 11 13 10 10 10 10 13 13 10 8 8 10 15 12 11 9 9 9 9 10 8 8 10 8 8 8 9 9 9 10 9 10 10 13 11 11 12 8 11 6 6 6 6 8 10 15 10 10 9 9 9 9 9 14 10 10 8 8 8 8 8 8 11 13 10 8 8 8 8 8 8 10 10 12 15 12 14 12 12 12 10 10 8 8 8 13 12 12 10 10 9 9 8 8 8 8 8 8 8 8 8 11 11 11 11 8 11 8 8 8 13 8 9 10 8 9 9 9 8 8 8 9 8 8 8 8 8 8 10 13 19 8 8 8 8 8 9 10 8 8 8 8 8 10 8 8 8 8 6 6 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no446_o01.g1 MSMg01no446_o01.g1 CHROMAT_FILE:
MSMg01no446_o01.g1 PHD_FILE: MSMg01no446_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:32 2005
         (417 letters)



>mm_chr16_57893575_57894391
          Length = 817

 Score =  775 bits (401), Expect = 0.0
 Identities = 413/417 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagttactcctgtaattttgagacgttttccacaacttgatgaatttttctttttctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagttactcctgtaattttgagacgttttccacaacttgatgaatttttctttttctac 260

                                                                       
Query: 61  caggtaagtatagagaatttgaactctcttagaaaaatccacctacatgaacacttctca 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 caggtaagtatagagaatttgaactctcttagagaaatccacctacatgaacacttctca 320

                                                                       
Query: 121 aagaagttggaagctcctgaagaggtcaatgaacattctgtgcaaggaacagaaaatgcc 180
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 321 aagaagttggaagctcctgaagaggtcagtgaacattctgagcaaggaacagaaaatgcc 380

                                                                       
Query: 181 tactgccaaccgaaggtagagcctggaggcagtgcctggccactgctggctccatctgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactgccaaccgaaggtagagcctggaggcagtgcctggccactgctggctccatctgct 440

                                                                       
Query: 241 tgtgtgcctgctgtttagtttggcaaaggctggctcctttgcaggagggaaatggtttct 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tgtgtgcctgctgtttagtttggcaaaggctggctcctttgcaggagggaaatgatttct 500

                                                                       
Query: 301 acattgggctgcagagtcggaggatgtggactcagaaggagaactgggttgttctggcta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acattgggctgcagagtcggaggatgtggactcagaaggagaactgggttgttctggcta 560

                                                                    
Query: 361 aatacatttgctttatttccgtgggacctccccaaacacattgatatttttataaga 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatacatttgctttatttccgtgggacctccccaaacacattgatatttttataaga 617


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space:   329664
Effective search space used:   329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information