Query= MSMg01no447_j10.b1 MSMg01no447_j10.b1 CHROMAT_FILE:
MSMg01no447_j10.b1 PHD_FILE: MSMg01no447_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:32 2005
(516 letters)
>mm_chr16_14045147_14046062
Length = 916
Score = 630 bits (326), Expect = 0.0
Identities = 355/380 (93%), Gaps = 24/380 (6%)
Strand = Plus / Minus
Query: 137 acgcaggcccctggagcttgctggccaaccggtttaactgaatcaataagctccaggttc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 acgcaggcccctggagcttgctggccaaccggtttaactgaatcaataagctccaggttc 857
Query: 197 agtgacagaccctgtctgaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa 256
||||||||||||||||| |||||||||||||||||||
Sbjct: 856 agtgacagaccctgtct------------------------gaaagaaagaaagaaagaa 821
Query: 257 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagag 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagag 761
Query: 317 gagagaattagaggaagacacctaatgtcaacttctggctctcatgtgtgtgtatgcaca 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gagagaattagaggaagacacctaatgtcaacttctggctctcatgtgtgtgtatgcaca 701
Query: 377 tacttgcacatgcaacacacacacatacatacacaaagtatgacattcagatgacctgag 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tacttgcacatgcaacacacacacatacatacacaaagtatgacattcagatgacctgag 641
Query: 437 cattactgtatgcaatttttctggcttagcgtacccatcttttgaagggtgtcacgggat 496
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 640 cattactgtatgcaatttttctggcttagtgtacccatcttttgaagggtgtcacgggat 581
Query: 497 gaatgaaatatgatggcata 516
||||||||||||||||||||
Sbjct: 580 gaatgaaatatgatggcata 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_j10.g1 MSMg01no447_j10.g1 CHROMAT_FILE:
MSMg01no447_j10.g1 PHD_FILE: MSMg01no447_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:32 2005
(353 letters)
>mm_chr16_13880503_13881255
Length = 753
Score = 638 bits (330), Expect = 0.0
Identities = 351/366 (95%), Gaps = 13/366 (3%)
Strand = Plus / Plus
Query: 1 tcacacatggtctgtgagcctatgaactgggttatctcctaggagcaatatttggctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacacatggtctgtgagcctatgaactgggttatctcctaggagcaatatttggctcta 260
Query: 61 ccaaaatcacaaatgcatacatgcattatctggcccaacatcctgcctctatgacttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 ccaaaatcacaaatgcatacatgcattatctggcccaacatcctgcctctatgacttcta 320
Query: 121 cacaaacacacttgccaagtgagaaatgacatatgtttaaagttattggctgcagcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaacacacttgccaagtgagaaatgacatatgtttaaagttattggctgcagcaata 380
Query: 181 tttgtatcagtaaaacagaaacacaaaataaactctattcataaaattctattcatcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtatcagtaaaacagaaacacaaaataaactctattcataaaattctattcatcatt 440
Query: 241 caaagtaaaataaagtcgctgttaacaaagagaaagttctctgtgtgacatgcagtgaag 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaagtaaaataaagttgctgttaacaaagagaaagttctctgtgtgacatgcagtgaag 500
Query: 301 tccaagacgcaagggaagaaagcc-------------ttaagtgctggaggggtgggtat 347
|||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tccaagacgcaagggaagaaagccagggggtacggtattaagtgctggaggggtgggtat 560
Query: 348 ggatgt 353
||||||
Sbjct: 561 ggatgt 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
