Query= MSMg01no449_g02.b1 MSMg01no449_g02.b1 CHROMAT_FILE:
MSMg01no449_g02.b1 PHD_FILE: MSMg01no449_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:59 2005
(239 letters)
>mm_chr16_40006158_40006795
Length = 638
Score = 362 bits (187), Expect = e-104
Identities = 190/191 (99%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 1 taatttatgctattttttttatctcaggaataatactactggatttccccccagttttac 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatttatgctattttttt-atctcaggaataatactactggatttccccccagttttac 259
Query: 61 agagttcccattgtcttttgtaatacttgctcccaccctccagaccaaggaatggtggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agagttcccattgtcttttgtaatacttgctcccaccctccagaccaaggaatggtggat 319
Query: 121 aataaatttccttttgtcatctcttcagaaccaaagttgagacataagtatattattatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aataaatttccttttgtcatctcttcagaaccaaagttgagacataagtatattattatt 379
Query: 181 attattattat 191
|||||||||||
Sbjct: 380 attattattat 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_g02.g1 MSMg01no449_g02.g1 CHROMAT_FILE:
MSMg01no449_g02.g1 PHD_FILE: MSMg01no449_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:59 2005
(247 letters)
>mm_chr16_40107866_40108512
Length = 647
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Minus
Query: 1 attacttattggagatttatgctagtaattttttctcatgtgaactgcaagctattaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 attacttattggagatttatgctagtaattttttctcatgtgaactgcaagctattaatc 387
Query: 61 ccattggatttgtatacaaaataatgaaattaatcatatgcagaaaggttatatactatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccattggatttgtatacaaaataatgaaattaatcatatgcagaaaggttatatactatt 327
Query: 121 ttgtcaaatattgtttctattatctttgggcatgctgtggtttaaacatgatcttacaat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 326 ttgtcaaatattgtttctattatctttgggcatgctgtggtttaaatatgatcttacaat 267
Query: 181 tttaagtgttaggactttgttgataatttaatagtgttggtgtaagatgtagtttaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttaagtgttaggactttgttgataatttaatagtgttggtgtaagatgtagtttaatat 207
Query: 241 gaaata 246
||||||
Sbjct: 206 gaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
