Query= MSMg01no450_h17.b1 MSMg01no450_h17.b1 CHROMAT_FILE:
MSMg01no450_h17.b1 PHD_FILE: MSMg01no450_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:25 2005
(496 letters)
>mm_chr16_59958568_59959463
Length = 896
Score = 721 bits (373), Expect = 0.0
Identities = 423/453 (93%), Gaps = 24/453 (5%)
Strand = Plus / Minus
Query: 1 cacaaagaatacctcaagacttgagttaataatctgtaatatgtacatgatacaagattc 60
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 447 cacaaagaatacctcaagactcgagttaataatctgtaacatgtacatgatacaagattc 388
Query: 61 cattttcatgatttaaaactacaaataatgcacttaaaatgagcaatagatacccagggt 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 387 cattttcatgatttaaaactacaaataatgcacttaaaatgagcagtagatacccagggt 328
Query: 121 gattttatataaagcactaagcccaagcagaaaacccctaaagaagtgacagccacaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gattttatataaagcactaagcccaagcagaaaacccctaaagaagtgacagccacaggt 268
Query: 181 agtagattgggatgtgtcattcagatcctgatgacagaaaaagatgaggagaaaacaaaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agtagattggggtgtgtcattcagatcctgatgacagaaaaagatgaggagaaaacaaaa 208
Query: 241 caaaac-----------attttttaacaaaaaaaa-----caaacaaacaagcaaacaaa 284
|||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 207 caaaacaaaacaaaacaa------aacaaaaaaaaaaaaccaaacaaacaagcaaacaaa 154
Query: 285 aacccttaacttctattctataaaatgtaagtaac--agtctatttgatttggttatata 342
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 153 aacccttaactcctattctataaaatgtaagtaacaaagtctatttgatttggttatata 94
Query: 343 gttgattagtacaaaaatgcaatatttttatcaacttcatgataaatggatttaatattt 402
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 93 gttgattagtacaaaaatgcaatatttttatcaacttcatgataaatggattttatattt 34
Query: 403 attgtttattgttgaatacaaatatgacactct 435
|||||||||||||||||||||||||||||||||
Sbjct: 33 attgtttattgttgaatacaaatatgacactct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_h17.g1 MSMg01no450_h17.g1 CHROMAT_FILE:
MSMg01no450_h17.g1 PHD_FILE: MSMg01no450_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:25 2005
(434 letters)
>mm_chr16_59774530_59775363
Length = 834
Score = 793 bits (410), Expect = 0.0
Identities = 431/444 (97%), Gaps = 10/444 (2%)
Strand = Plus / Plus
Query: 1 agctatccaccgtgaatttgacatcatattatttaagatggtgctttgggttatagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctatccaccgtgaatttgacatcatattatttaagatggtgctttgggttatagcttt 260
Query: 61 agccttttcttcctggttccgtccccctgagtactctggaaaatgcgttagagttgttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccttttcttcctggttccgtccccctgagtactctggaaaatgcgttagagttgttag 320
Query: 121 agtctttatacatctccaaagaaacttacacgtcattcatttataagtgtgtatagatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtctttatacatctccaaagaaacttacacgtcattcatttataagtgtgtatagatta 380
Query: 181 ccccgtaacacctaagaagaagatattcctgaatccctggctccttattatccttgattt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 ccccgtaacacctaaaaagaagatattcctgaatccctggctccttattatccttgaagt 440
Query: 241 attagaggcaatgttgctaaatatattaagaagaacatatattgaaagctaaaatacctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attagaggcaatgttgctaaatatattaagaagaacatatattgaaagctaaaatacctc 500
Query: 301 aggcacgggcaggtttaatctgaaggaagtcaagccacgcatctccatgaagatcataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggcacgggcaggtttaatctgaaggaagtcaagccacgcatctccatgaagatcataga 560
Query: 361 gt----------caggagctcaaagacgaaatcttagaagtgtgtgtggttattattatt 410
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttccagcgtgtcaggagctcaaagacgaaatcttagaagtgtgtgtggttattattatt 620
Query: 411 attattattattattattattatt 434
||||||||||||||||||||||||
Sbjct: 621 attattattattattattattatt 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
