NNNGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGAACTTTTCAGCTGGGGAACGGCGGTAACCCGTAAGTA
TAGCTTTACGAGGTAAGCCTGGCCTTGAACTTTCTAAGGAAATTCAAGAC
AGTCTATCAGAAGTAAAGTGGAAAATAGCTTTATAAGGTATGTTTGGCCT
TGAACTTTCTCTAGTGTTAGAAGCCCTTTTGTTCCTTTTCACATGTTATC
AAGTGGTTAAGGCAGGGCGGATTCTGGATGAAGTTCAGGACAATCTATCA
GAAGTAAAGCGGGGAGAGAGAATAGGAGCAAAGAGAAAATATGGTACACA
AAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCTGAGGAAAAGTTTA
GGTCAGGTAAGAATACCTGGGGAGAGATTAGAAGGAAGGAGAAGGAAAAA
GAAAAGAAAAAAGATCAATTAGAGAAGCCAGTTCTTAGTAGTTCTGAATC
AGATGAAAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCGAGCAGGTGAAG
CCACTGGACAATAATGACAGAGGCAGGCTCTTGCAGCCTACAAGGTCTTA
TTGTCCACCCTGGAGTTGTAGATCAGGATTGTAAAGGGGAACTTCAGGTT
CTCTGTTCTTGTCCTCAAGTTGTCTTTTCTATATCACAAGGGGACAGAAT
AGCTCAACTAATAATTTTGCCAAGCCTACATGGCTGNTTTTTCTTCCTCT
GGGATTCCTAG

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAACACATTCTCTTGAGTG
AACAGAGTTCCTGAGCTAGAAGCATTAGCTTTGTCTAAAATGAGTAGATA
TGATGTCATTTATTTTTTTTTTTGAAAAATCATGTTATGATCATGTGAAG
GGCGAGACACAGTAATAGAAGACAACACATGTGAAATTTTGGCTTGAAGG
GGAATTCTCAATTGAATTTGATGTGGAAAACCAGCTATACTTTTTTCATG
GAATCTTTATGCTTCTGCTTCCCTTTCATGTTATATCACCATTGTGTATG
GGTACCTCACCATGAGTCAAATATAAACAGGTAATGTGATAGTTTTATTT
GGGTACAGGACATTATTACATACACTTTTTAAATATAATTTGAAAGATGA
TATATGTCCATGTAACAGGTAATGAAACCAAGGATGTGTGAGAAAGTGCC
ATGGAAAGCAGTCAGTGATAAAGACAGCAGGTGCTGTAAAAGTACTGGGA
AAGAAAAACTCAAATTTCACTATTTTCATAGAAATAAAATCTGTTAAATT
TTAAAATAAACTTGATTTAAGGGGATTTCACTTCTAAGCTTATTCTGCAT
GTTCAAACTTTTGTAAACTAGAGACTCTCCTTGCCTTCCCAGCTTGCTAA
CCAGGTAGTCAGAGAAAGAACAGAAGAGTCACTTCTGTCCCTACCATCTG
CCCATAAT

Query= MSMg01no452_n10.g1 MSMg01no452_n10.g1 CHROMAT_FILE:
MSMg01no452_n10.g1 PHD_FILE: MSMg01no452_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:31 2005
         (635 letters)



>mm_chr16_40013955_40014985
          Length = 1031

 Score = 1185 bits (613), Expect = 0.0
 Identities = 628/635 (98%), Gaps = 4/635 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caacacattctcttgagtgaacagagttcctgagctagaagcattagctttgtctaaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 caacacattctcttgagtgaacagagttcctgagctagaagcattagctttgtctaaaat 772

                                                                       
Query: 61  gagtagatatgatgtcatttatttttttttttgaaaaatcatgttatgatcatgtgaagg 120
           ||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 771 gagtagatatgatgtc----attttttttttggaaaaatcatgttatgatcatgtgaagg 716

                                                                       
Query: 121 gcgagacacagtaatagaagacaacacatgtgaaattttggcttgaaggggaattctcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gcgagacacagtaatagaagacaacacatgtgaaattttggcttgaaggggaattctcaa 656

                                                                       
Query: 181 ttgaatttgatgtggaaaaccagctatacttttttcatggaatctttatgcttctgcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttgaatttgatgtggaaaaccagctatacttttttcatggaatctttatgcttctgcttc 596

                                                                       
Query: 241 cctttcatgttatatcaccattgtgtatgggtacctcaccatgagtcaaatataaacagg 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 595 cctttcatgttatatcaccattgtatatgggtacctcaccatgagtcaaatataaacagg 536

                                                                       
Query: 301 taatgtgatagttttatttgggtacaggacattattacatacactttttaaatataattt 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 535 taatgtgatagttttatttgggtacaggacattattacatagactttttaaatataattt 476

                                                                       
Query: 361 gaaagatgatatatgtccatgtaacaggtaatgaaaccaaggatgtgtgagaaagtgcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaagatgatatatgtccatgtaacaggtaatgaaaccaaggatgtgtgagaaagtgcca 416

                                                                       
Query: 421 tggaaagcagtcagtgataaagacagcaggtgctgtaaaagtactgggaaagaaaaactc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tggaaagcagtcagtgataaagacagcaggtgctgtaaaagtactgggaaagaaaaactc 356

                                                                       
Query: 481 aaatttcactattttcatagaaataaaatctgttaaattttaaaataaacttgatttaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aaatttcactattttcatagaaataaaatctgttaaattttaaaataaacttgatttaag 296

                                                                       
Query: 541 gggatttcacttctaagcttattctgcatgttcaaacttttgtaaactagagactctcct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gggatttcacttctaagcttattctgcatgttcaaacttttgtaaactagagactctcct 236

                                              
Query: 601 tgccttcccagcttgctaaccaggtagtcagagaa 635
           |||||||||||||||||||||||||||||||||||
Sbjct: 235 tgccttcccagcttgctaaccaggtagtcagagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1031
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1021
Effective search space:   638125
Effective search space used:   638125
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)