Query= MSMg01no454_l22.b1 MSMg01no454_l22.b1 CHROMAT_FILE:
MSMg01no454_l22.b1 PHD_FILE: MSMg01no454_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:02 2005
(249 letters)
>mm_chr16_95843195_95843845
Length = 651
Score = 443 bits (229), Expect = e-129
Identities = 245/251 (97%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 1 caagcttcctggaaacgtctgggtttccctcgccatctggcttgggcttggtaacgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caagcttcctggaaacgtctgggtttccctcgccatctggcttgggcttggtaacgatca 392
Query: 61 actgttattttgtgccattttattaacctttattttagattatgcgcccatcttggagag 120
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 391 actgttatattgtgccattttattaacctttattttagattatgcacccatcttggagag 332
Query: 121 gaggctagagtgttatcagaatctccatttttctgatctccatccttttaataacagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaggctagagtgttatcagaatctccatttttctgatctccatccttttaataacagtgt 272
Query: 181 ggctaactcagttttgttcaaaggaaggggcaaaaaaaaaaa--gtttcagatctaagtc 238
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 271 ggctaactcagttttgttcaaaggaaatggcaaaaaaaaaaaaagtttcagatctaagtc 212
Query: 239 tctaggaagga 249
|||||||||||
Sbjct: 211 tctaggaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_l22.g1 MSMg01no454_l22.g1 CHROMAT_FILE:
MSMg01no454_l22.g1 PHD_FILE: MSMg01no454_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:03 2005
(245 letters)
>mm_chr16_95660229_95660873
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Plus
Query: 1 actgaaggagccacctaataggtgcccagcgcacagtgggaggaagcacacagactcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgaaggagccacctaataggtgcccagcgcacagtgggaggaagcacacagactcctt 260
Query: 61 gctgcctgggctgccgtcgactaaggttcctgaaggcagcttcctctgagctatgcctct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgcctgggctgccgtcaactaaggttcctgaaggcagcttcctctgagctatgcctct 320
Query: 121 cattcccaacaatggcgcagagtatgacgtgtgagctgctccctgcctaggtggggtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattcccaacaatggcgcagagtatgacgtgtgagctgctccctgcctaggtggggtcct 380
Query: 181 cagaaatgaaactgatcacaatatgactgtttgaagaccttcaaaccaacaacgcccaac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaaatgaaactgatcacaatatgactgtttgaagaccttcaaaccaacaacgcccaat 440
Query: 241 gtgtg 245
|||||
Sbjct: 441 gtgtg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
