TCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGGTTCCCCCTGTCTCTGCCACTTACAGCTGTGCATGGTTTAT
AGTTAATATTTTTTGTAACTAAGTATCATGTCTATAGAAAAATAATTTTC
CTACCTCATTTCCTTGGCAGAATCTCCTGATGGTCTAACATATAGACTGC
CCTGGGTGGTCTAAAACTTCACAATGAAACCCATGTTATTTTCCTTTGTT
TTCATTCTCAACATTGTAACTTGAACACAGGGTCTTGTACATATTCATGC
CTGACGGATAAATGTCCCATCATTCAAATATATAGTCCCAACTTAAAGTG
TGTGATTATTAAAAGCATTGTTTGAAAAGGAACCAAAGAAGCATTGCCCC
TACTTTCCCCAACTTATTCTTATTTTTGCTTGAGAAATGATTGCATGAAA
TTTCAATAACAGCACAAACAGGATGAACCATTTTGAGTCTAGGACTGGGA
AGTGAGTAATTGTGTTGGCAATGTTTCCCAGTGCCGTGCTCTCCTTCCTT
AAACAGAGGAAAAGTTCATACAAGTATATGCACTCCCGCTGCTCTAAGGC
TTATGTGCACTTTATTATACAAAGAAAAAAATGTTATTGATGAATTTTAA
ATGTTGTCAAAAATGAATAATGGCCTCCCGTATGCTTGCAATTTTTTGGT
AAAATTTCTTTTCTTTTGTTTATTATACTTTCCTTTTCTGCCATTCGTAT
CG

NNCCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTCCAGCGAAATTCTACTGCACAAATAGAAACAGAA
ACCAATCAGTAGATTCCACCACCCTCTCCTTGGAGAACATCTTCACACAG
AACAACAGCCTGACTGTTCCTCTGAAGACCAAACAGTCTAAAGGCATCCC
AGGAGATCTACTGCAACCAGGGCAACAGATCAGCAGCTTCTCTGCCACTC
TGAAAAGGTCTGAGTTGGAAGGTCTCACAGGTAGTCTGCTACAGCCAGGG
TGGCAGGCATACAGGAGATTTTATTCAGCCCAGTGACAAAAGAGACAAAC
ACAAAGCAGAGCCACCTAGACCAGCAAACACCAGGGAAAACAAATGGAGA
AAGACAAGAACAAGACTATAAGCAACAGAAGCTAATATATGTTGGCATCA
TCAGAACCCAGTTCTCACACCACAGCAAGCCCTGAATACACCAACACATC
TGAAAATCAGGAAGCTGACTTAAATTCTATCTCATGAGGATAATAGAGTC
CTTTAAGGAGGATATAAATAACTCACTGAGAGAAATACAGGATAACACAA
TCAAACAGGTCAAGGAATTGAATAAAGCAGCCCAAGACCTAACAGTGGAA
GTAGAAGCAATAAGGAAAACACAAATGGAGGCAATTCTGGAAAATGAAAA
CCTAGGATATACGTCAGGAATTACCGATGTAAGTATTATCAACAGAA

Query= MSMg01no456_p20.b1 MSMg01no456_p20.b1 CHROMAT_FILE:
MSMg01no456_p20.b1 PHD_FILE: MSMg01no456_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:00 2005
         (475 letters)



>mm_chr16_80376316_80377190
          Length = 875

 Score =  766 bits (396), Expect = 0.0
 Identities = 444/468 (94%), Gaps = 13/468 (2%)
 Strand = Plus / Plus

                                                                       
Query: 21  cctgtctctgccacttacagctgtgcatggtttatagttaatattttttgtaactaagta 80
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cctgtttctgccacctacagctgtgcatggtttatagttaatattttttgtaactaagta 267

                                                                       
Query: 81  tcatgtctatagaaaaataattttcctacctcatttccttggcagaatctcctgatggtc 140
           || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 268 tcgtgtctatagaaaaataattttcctacctcatctccttggcagaatctcctgatggtc 327

                                                                       
Query: 141 taacatatagactgccctgggtggt-------------ctaaaacttcacaatgaaaccc 187
           |||||||||||||||||||||||||             ||||||||||||||||||||||
Sbjct: 328 taacatatagactgccctgggtggtggatgcactttcactaaaacttcacaatgaaaccc 387

                                                                       
Query: 188 atgttattttcctttgttttcattctcaacattgtaacttgaacacagggtcttgtacat 247
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 388 atgttattttcctttgttttcattctcaacattgtaacttgaacacagagtcttgtacat 447

                                                                       
Query: 248 attcatgcctgacggataaatgtcccatcattcaaatatatagtcccaacttaaagtgtg 307
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 448 attcatgcctgacagataaatgtcccatcattcaaatatatagtcccaccttaaagtgtg 507

                                                                       
Query: 308 tgattattaaaagcattgtttgaaaaggaaccaaagaagcattgcccctactttccccaa 367
           ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 508 tgattattaaaagcattgtttgaaaaggaactaaagaaccattgcccctactttccccaa 567

                                                                       
Query: 368 cttattcttatttttgcttgagaaatgattgcatgaaatttcaataacagcacaaacagg 427
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 568 cttattcttatttttgcttgagaaatgattgcatgaaatttaaataacagcacaaatagg 627

                                                           
Query: 428 atgaaccattttgagtctaggactgggaagtgagtaattgtgttggca 475
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 atgaaccattttgagtctaggactgggaagtgagtaattgtgttggca 675


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space:   402225
Effective search space used:   402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)