Query= MSMg01no458_j05.b1 MSMg01no458_j05.b1 CHROMAT_FILE:
MSMg01no458_j05.b1 PHD_FILE: MSMg01no458_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:13 2005
(631 letters)
>mm_chr16_67441617_67442647
Length = 1031
Score = 1154 bits (597), Expect = 0.0
Identities = 622/631 (98%)
Strand = Plus / Plus
Query: 1 ccccattttttaatgggtttatttgattttctgaagtccaccttcttgagttctttatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccattttttaatgggtttatttgattttctgaagtccaccttcttgagttctttatat 260
Query: 61 atattggatattagtcccgtatctgatttaggataggtaaagatcctttcccaatctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattggatattagtcccgtatctgatttaggataggtaaagatcctttcccaatctgtt 320
Query: 121 ggtggtctttttgtcttattgacagtgtcttttaccttgcagaagctttgaagtttcagt 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtggtctttttgtcttattgacggtgtcttttaccttgcagaagctttgaagtttcagt 380
Query: 181 tctacagaatattcaccttctttacttgctggtattctgagcatagtttacatatgctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctacagaatattcaccttctttacttgctggtattctgagcatagtttacatatgctta 440
Query: 241 aaatataaaatttgtaatataaattaaataaattcataatgtgcttattcagtataaagt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatataaaatttgcaatataaattaaataaattcataatgtgcttattcagtataaagt 500
Query: 301 acgccattatttaatagagtcggagcaaaaggtttgaatttgtgtggacacactaaatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgccattatttaatagagtcggagcaaaaggtttgaatttgtgtggacacactaaatac 560
Query: 361 attcatgttctcatgttatcttttgagacaaatattctaaaggttagcagcggttcctat 420
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 attcatgttctcatgttatcttttgagacaaatattgtaaaggttagcagcggttcctac 620
Query: 421 ttcttaaaacattcattgagttattactatttataattttaatattcaaccttatataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttaaaacattcattgagttattactatttataattttaatattcaaccttatataaa 680
Query: 481 tcaagttctacaattgctttttaaaattatgatatattattattgtacattaataaggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaagttctacaattgctttttaaaattatgatatattattattgtacattaataaggtg 740
Query: 541 atattattagggtttctgtaaattggttaatgacccatannaatggctagcaatttctac 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 741 atattattagggtttctgtaaattggttaatgacccataaaaatggctagcaatttctcc 800
Query: 601 aggctatttaaggaaaatgagaagttgaaat 631
|| ||||||||||||||||||||||||||||
Sbjct: 801 agactatttaaggaaaatgagaagttgaaat 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_j05.g1 MSMg01no458_j05.g1 CHROMAT_FILE:
MSMg01no458_j05.g1 PHD_FILE: MSMg01no458_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:13 2005
(618 letters)
>mm_chr16_67580438_67581454
Length = 1017
Score = 1180 bits (610), Expect = 0.0
Identities = 616/618 (99%), Gaps = 1/618 (0%)
Strand = Plus / Minus
Query: 1 tgccttggaatcaaagacacaacatttacaaattccctttatcttcacagtatttagaag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 817 tgccttggaatcaaagacacaacatttacaaattccctttatcttcac-gtatttagaag 759
Query: 61 atgctatatggcagggtgtttgctcaataaaacttcaaattgctttgcagtctcctggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 atgctatatggcagggtgtttgctcaataaaacttcaaattgctttgcagtctcctggga 699
Query: 121 tggattttgacatcttgtaaggaaattcagactgatgtgcccatgttgagaatttgcgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tggattttgacatcttgtaaggaaattcagactgatgtgcccatgttgagaatttgcgca 639
Query: 181 attaaagggtgtcattttctttcttatcctgagattcaaatgatgctgagaaatcttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 attaaagggtgtcattttctttcttatcctgagattcaaatgatgctgagaaatcttcaa 579
Query: 241 tctctgtagtaagcgattgaaacacatcatcatttgtgcctgatttccccattattttat 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tctctgtagtaagggattgaaacacatcatcatttgtgcctgatttccccattattttat 519
Query: 301 ttgtcatttgatcataagttattgtgtgcctcatagaatgcattttaaatgtagttttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttgtcatttgatcataagttattgtgtgcctcatagaatgcattttaaatgtagttttat 459
Query: 361 ttttaaattatttgtaagtttactttttgtatttccatcatattctttcctctccttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttttaaattatttgtaagtttactttttgtatttccatcatattctttcctctccttaaa 399
Query: 421 aaatgcattatataaacttttactccttccgcacaaatgtcagagaaaccagtctatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaatgcattatataaacttttactccttccgcacaaatgtcagagaaaccagtctatttt 339
Query: 481 ctataaaagtgacagacgagtttaaatatttttaagcctataggaatgtttctttattta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctataaaagtgacagacgagtttaaatatttttaagcctataggaatgtttctttattta 279
Query: 541 cctatgttctttggtattattcataagttatatggaggtcatctggaaatgattaaattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cctatgttctttggtattattcataagttatatggaggtcatctggaaatgattaaattt 219
Query: 601 tagatttactagtatcac 618
||||||||||||||||||
Sbjct: 218 tagatttactagtatcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1017
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1007
Effective search space: 612256
Effective search space used: 612256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
