Query= MSMg01no459_e15.b1 MSMg01no459_e15.b1 CHROMAT_FILE:
MSMg01no459_e15.b1 PHD_FILE: MSMg01no459_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:09 2005
(455 letters)
>mm_chr16_86507347_86508201
Length = 855
Score = 758 bits (392), Expect = 0.0
Identities = 439/455 (96%)
Strand = Plus / Minus
Query: 1 caagcagagcaattcagtgagaagccaaaagagctagttcaaatcagtcagcttggagaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 849 caagcagagcaattcagtgagaagccaaaagagctagttcaaatcggtcagcttggagaa 790
Query: 61 gagttttgagacagaacaactgagttgaaggagcgagccacacagcatctagaaagacct 120
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 789 gagttttgagacagaacagctgagttgaaggagcgagccacacagtatctagaaagaact 730
Query: 121 aaaattggtgagcttattcagaagtgaacctctacgacatcaattacatttggtgaataa 180
||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||
Sbjct: 729 aaaattggtgagcttattcagaagtaaacctctactacaaaaattacatttggtgaataa 670
Query: 181 aagttattattacagggaatttttaatattgtgtaaataagcacatatcttctgaatctg 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aagttattattacagggagtttttaatattgtgtaaataagcacatatcttctgaatctg 610
Query: 241 ccaagttctcctcctatttctctcctcataacggaatactctagcccacatacttacatt 300
||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 609 ccaagttctccacctatttctctcctcataatggaatactctagcccacataattacatt 550
Query: 301 ctttctttcaataaagctatcatcatccttcaacatcctgtggtattttatgtgacaaga 360
|||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 549 ctttttttcaataaagctatcatcatccttcaacgtcatgtggtattttatgtgacaaga 490
Query: 361 cactctcatgacctactgttgtcatttttctaaactagttttactagctctttgagaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cactctcatgacctactgttgtcatttttctaaactagttttactagctctttgagaatt 430
Query: 421 ttgtacaggnttgatcttaatcattctttctcccc 455
||||||||| |||||||||||||||||||||||||
Sbjct: 429 ttgtacaggtttgatcttaatcattctttctcccc 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_e15.g1 MSMg01no459_e15.g1 CHROMAT_FILE:
MSMg01no459_e15.g1 PHD_FILE: MSMg01no459_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:10 2005
(399 letters)
>mm_chr16_86291080_86291877
Length = 798
Score = 710 bits (367), Expect = 0.0
Identities = 391/399 (97%), Gaps = 1/399 (0%)
Strand = Plus / Plus
Query: 1 tcccaaccattgcagatttgcatgaaaaaaaatatggaaggaattaaacatcagggttta 60
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 201 tcccaaccattgcagatttgcatg-aaaaaaatatgaaaggaattaaacatcagggttta 259
Query: 61 gtaagagtgtagccagttcttcttaaacatgcttgcctgtttccatttgttttcagggaa 120
|| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 260 gtcagagtgtagccagttcttcttaaacgtgcttgcctgtttctgtttgttttcagggaa 319
Query: 121 cactgagattactacttagttctggggaggagccttccttcatttcatggatagattata 180
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cactcagattactatttagttctggggaggagccttccttcatttcatggatagattata 379
Query: 181 ttttattcctagcatgaatgtataatgccatttgtttaattaagtattgttatattcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttattcctagcatgaatgtataatgccatttgtttaattaagtattgttatattcagt 439
Query: 241 ggtaacttaccatcctggcctttctcagcatctatactacacgatattccaacatccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtaacttaccatcctggcctttctcagcatctatactacacgatattccaacatccttt 499
Query: 301 catctactttagtaaaaatcaacatcagtgggtctctgctaaaagcccaaagagatttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catctactttagtaaaaatcaacatcagtgggtctctgctaaaagcccaaagagatttgt 559
Query: 361 taatgtgctcagttcttactaaacagctgtaattgattt 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taatgtgctcagttcttactaaacagctgtaattgattt 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 798
Length adjustment: 9
Effective length of query: 390
Effective length of database: 789
Effective search space: 307710
Effective search space used: 307710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
