Query= MSMg01no459_h06.b1 MSMg01no459_h06.b1 CHROMAT_FILE:
MSMg01no459_h06.b1 PHD_FILE: MSMg01no459_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:23 2005
(369 letters)
>mm_chr16_21568792_21569560
Length = 769
Score = 530 bits (274), Expect = e-155
Identities = 295/302 (97%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 69 tgaatccagcactggggggcagaggtaggaaatttctgtgagtctaaggctagcctgggc 128
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tgaatccaacactggggggcagaggtaggaaatttctgtgagtctaaggctagcctgggc 710
Query: 129 tacacagtgaaacttgtctcaagagaccaaacaaataaac-aaaacccccatacatacta 187
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 709 tacacagtgaaacttgtctcaagagaccaaacaaataaacaaaaacccccatacatacta 650
Query: 188 ctcatgctttttttccttcagtgctggggatgaataaagggcctcacactatgcaagcaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctcatgctttttttccttcagtgctggggatgaataaagggcctcacactatgcaagcaa 590
Query: 248 ggactccactactgagcaaccctgggtcctaagttctttgatgagcgagacccctgaagc 307
|| |||||||||||||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct: 589 gggctccactactgagcaaccctgggtcctaagttctgtgatgggctagacccctgaagc 530
Query: 308 agaacccttcatcagatgggttgcccagatgcctcgaagcacaggggaaggagcactcaa 367
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 529 agaacccttcatcagatgggttgcccagatgcctcgaagcacaggggaaggaacactcaa 470
Query: 368 gg 369
||
Sbjct: 469 gg 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_h06.g1 MSMg01no459_h06.g1 CHROMAT_FILE:
MSMg01no459_h06.g1 PHD_FILE: MSMg01no459_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:23 2005
(168 letters)
>mm_chr16_21397085_21397652
Length = 568
Score = 317 bits (164), Expect = 2e-91
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 1 ctatcactgtttggtggtgtctcccaaacccttacctctaacctgcttactgctcctgct 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ctatcactgtttggtggtgtctcccaaacccttgcctctaacctgcttactgctcctgct 260
Query: 61 gggcagacatctgtgtccccactccaagagaactctgtttggctggtggtagtagctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggcagacatctgtgtccccactccaagagaactctgtttggctggtggtagtagctcag 320
Query: 121 tgtggtcacaagctcatgaagtggtagtaatgtcagctggagtgggaa 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggtcacaagctcatgaagtggtagtaatgtcagctggagtgggaa 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
