Query= MSMg01no461_e21.b1 MSMg01no461_e21.b1 CHROMAT_FILE:
MSMg01no461_e21.b1 PHD_FILE: MSMg01no461_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:51 2005
(249 letters)
>mm_chr16_9757076_9757724
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 1 aggctcatcatgaactgctttggctaactgagacccccttggtgctatcccagccctgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggctcatcatgaactgctttggctaactgagacccccttggtgctatcccagccctgac 390
Query: 61 tctgcagtctacaaggttattgcctagaatcttagagttcctgcagttagggtattggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tctgcagtctacaaggttattgcctagaatcttagagttcctgcagttagggtattggaa 330
Query: 121 cgatgcactgtagtccatggtgtggagggggcagcttgcagggtatagagtattctggaa 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caatgcactgtagtccatggtgtggagggggcagcttgcagggtatagagtattctggaa 270
Query: 181 cttaccctagacccgtttctgtctttgtcatttcagacggtggggtgtagagaatggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cttaccctagacccgtttctgtctttgtcatttcagacggtggggtgtagagaatggggg 210
Query: 241 aatttttgt 249
|||||||||
Sbjct: 209 aatttttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_e21.g1 MSMg01no461_e21.g1 CHROMAT_FILE:
MSMg01no461_e21.g1 PHD_FILE: MSMg01no461_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:51 2005
(467 letters)
>mm_chr16_9569097_9569963
Length = 867
Score = 849 bits (439), Expect = 0.0
Identities = 460/471 (97%), Gaps = 8/471 (1%)
Strand = Plus / Plus
Query: 1 caaagtttgtaattgtttctcatggaaaaacagacaatgtattagtacatttctgaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagtttgtaattgtttctcatggaaaaacagacaatgtattagtacatttctgaacct 260
Query: 61 tcgctatttgctctgttatcaatagtctttgattggagccctttaaaagcttgaaacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgctatttgctctgttatcaatagtctttgattggagccctttaaaagcttgaaacaga 320
Query: 121 aaaatgtcagatcaatgagaaatattgaaaatgccaaagacaaacttatgttagctggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatgtcagatcaatgagaaatattgaaaatgccaaagacaaacttatgttagctggag 380
Query: 181 aacaattaaccttattaatttaaaaggcatctgtggtattggctaggtgttatgctaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaattaaccttattaatttaaaaggcatctgtggtattggctaggtgttatgctaata 440
Query: 241 tccttttg----ttttttcattttaaatccttcccaaaggtgtgaaagagaattaagtgg 296
|||||||| || |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tccttttgaaggtt----cattttcaatccttcccaaaggtgtgaaagagaattaagtgg 496
Query: 297 aagaggccatgacccagggctacaggagatgagaaatgatctagcattgtaaaaatgcag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagaggccatgacccagggctacaggagatgagaaatgatctagcattgtaaaaatgcag 556
Query: 357 actcatcgatctgctgatatgatatctaaaaggagctggtgaggggtgattgcttgtgtc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 557 actcatcgatctgctgatatgatatctaaaaggagctggtgaggggtgattgcttctgtc 616
Query: 417 ttgcttcttcctgaagcctgctgatgccttctttgggaagttaatctgagg 467
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 617 ttgcttcttcctgaagcctgctgatgccttatttgggaagttaatctgagg 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
