GGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCCTTATTTCCGAGAACAAGTTTACACAACAGTCCTATAAAG
AGCCAACCTTATTCTGAGCTATGGTTGTATTATTTTTAATTGGGTTGTTG
AGAATTTCACACAGTGCATTTTTTAAAAGATTTATTTATTTTATTTATAT
GATTACACTGCAGCTGTGTTCAGACACACCAGAAGTGGGCATCAGATCCT
ATTACAGATGGTTGTGAGCCACCATGTGTTTTCTGGGAATTGAACCCAGG
ACGTCTAGAAGAGCAGTCAGTGCTCTTAACTTCTGAACCATCTCTCCAGC
CCCATACAATGCATTTGGGTCATATTTATCCCCCTCCTCCAAGTCCTCAC
AGATCCACCCTGCTTCCCTACCCACACAACTAGGTGTCCTCTTCTTTTAA
ATCCATCAGGCCTGGCTTGTGCAGCTTATACACTCTTGGATGTGTGGTCT
TACACTGGAGTGTCGACATGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCCATATATATATATATATATATTAGCTGCCTATAGCTTCTTA
CCTAAGAGTGGGACTCGAACCCCACGTCTCTCCACGCTGGTGCCTCGTGT
GTTTTGAGCTTGTCCCATTCATGTGCCTATCGCCACCCCCCTGAGAGCTA
CCCCGTATTTCCCCCTTGTGGTCCCTCTCGCATTGTGCGTCCCTCCTCG

AAAAAAACCAACGCCCCCCCCGCGCCCCCAACCCTCCCCCACTTCACCCA
TAACAACAAAAAAAACCACAACAAAACAAAAACCCAATACTACCCACCTT
TCCCCCAAGAACAATCACCCCCCCCAACAACCGCAACCAATAACATAACC
CAATTCCAACCCAACCCCTCCCTCCACCACCTCCACCCAAAGAGCGCGCC
GCAAGCGCTAGGCCAGAGGAGCGGGGGCGTTGCATCGTACTAGAGATCTA
TGTGCTGTACAGTTGACCTTCACCAGTCGCACATCATCGNCACTTTNTAG
ACTGTTAGATGCTATGACTTTTAGGCA

Query= MSMg01no464_a01.b1 MSMg01no464_a01.b1 CHROMAT_FILE:
MSMg01no464_a01.b1 PHD_FILE: MSMg01no464_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:37 2005
         (537 letters)



>mm_chr16_90543915_90544851
          Length = 937

 Score =  522 bits (270), Expect = e-152
 Identities = 308/322 (95%), Gaps = 5/322 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccttatttcc--gagaacaagtttacacaacagtcctataaagagccaacctt 62
           ||||||||||||   ||  |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 320 gaattctcctta--accctgagaacaagtttacacaacactcctataaagagccaacctt 263

                                                                       
Query: 63  attctgagctatggttgtattatttttaattgggttgttgagaatttcacacagtgcatt 122
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 attctgagctatggttgtgttatttttaattgggttgttgagaatttcacacagtgcatt 203

                                                                       
Query: 123 ttttaaaagatttatttattttatttatatgattacactgcagctgtgttcagacacacc 182
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 ttttaaaagatttatttattttatttatatgagtacactgcagctgtgttcagacacacc 143

                                                                       
Query: 183 agaagtgggcatcagatcctattacagatggttgtgagccaccatgtgttttctgggaat 242
           ||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||||
Sbjct: 142 agaagtgggcatcagatcctattacagatggttgtgagccagcaggtggttgctgggaat 83

                                                                       
Query: 243 tgaacccaggac-gtctagaagagcagtcagtgctcttaacttctgaaccatctctccag 301
           |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 82  tgaacccaggaccgtctagaagagcagtcagtgctcttaactgctgaaccatctctccag 23

                                 
Query: 302 ccccatacaatgcatttgggtc 323
           ||||||||||||||||||||||
Sbjct: 22  ccccatacaatgcatttgggtc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)