XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CACTTTGCGTTTATCATCATATGCTAGAGTGAAAGGGTTGAAGGAAATGG
AGCTGTATCCTGAACATAATTGTCAGCTCCCACCCACTCATTCCGTTTAC
TCACCCACCAATTTCCTCATCAAAAAAGTGAGTAGAAAATTAATGGCAAT
AAGTAGGAGAAGCCACAGTGCCTGTTAAAGCATTTCATGCAGATTTAGTT
CAGGATAGATGTACAGTTATTCTCTGGTAATTAACATCTGGACTGTGGCA
TCTACATACTCACTACACTCTCAATGGCACAGAAAACCAAATTGTGGAAT
TTCTAAGGGGACTTAGCATCTCAGCCAACATAACAACATGAGAAGGTTCA
TAGTGTCCTAGCTAGTGCTAAAATAGTTTCCTCTTCCAGATTTCCAAGTT
CTTAATGTTGATAACTCATCCTGACTGTAGCATGACCTTAGATTTAGCAT
ACAGAAACAAACATCTACTGGCAGAAATGTTAGACAGCTCAACGATTATT
TTGTGTTTAAAATTGTGTTGATAACCAATAATTTATTGCATATTGTCATG
GATCTGAAAATTGTATCTCTGNAAATGCGATGCTAAACATAATTCTATAA
TTTGCATACATCTCGCTACATACTCCATGTAGTATGCAAACACACTGAGC
CCGAAAGCAAACCACATCAACTGTAGTAACGGTAACN

TCACATCAGATTNATTATATCCTTAGGATCCCNNCCTTTCCCTCCACCTA
GCCCCCCCGGCGCGTGACTCCTGTGCTTGTCTTCTCTTCGGAAAACCCAA
CCTCCAACCCTGCGTTTATTTTGTCGACTCTCGCTTTTCGCTTCGCTTCC
CTCCGCATAGTTTACTGGAGGACATAGATCTCTCTTATGTTCCCTCACAC
CCGCCCTAGCCTCTCAATCCCGCCCCCGCCCCACTTCATCTCCTCCCCCC
CCGCCGCCCGCCGTTTGGCGACGCCTTATTGTTTCGGTCGACTCTGTTAC
ACCGCGCCTACACCTTCTTTTATAACAATACTCCCCCCCTAACGTTTTGG
GGNTAGTGGCGGGTGGGGCGGTCGCAAAAAAGTCGAGGCAAGCAAAAACA
CAACCGTGATGCCACCGGACAAGTCCTTCTCACCGACACCCGCCCCCTCT
GAGCCCCGGTCCCCCCCCTCTCTTTTTCCCCCTTCTTTAANNCACTACNN
TNTTCTTTTTTNNNNNNNNNNNCCCNNNAAGAAGNNNNCCGGTTTGACTT
ATGTANTAGNNCCGTNAAGGAAACGNCCGTNGCTANGTCTAAACCCGGGA
NNNNTGNACNTNNANGNNANGNCNTNNGCCAANCGGNNNCTNCGCGTNCA
GNNCTANNGANNTCCGANCTTAAGGACCAGCTCCCNAAGAAAGGTGACNG
GCGNCGGANTTTANCCTNNGTACCGNNNATTCNTNGTGGTACNTTGTNCG
CCNGGATNGGGGTTNCGTNGGATTCGCNANNNTNGCNCACCTCCGNNNNT
NNAGNNTNNCTNGCTTGNAANNCCTNNGNTNNGNNNGNNATCTGTTGNCN
AAAGCAAANAGANNTTCCGNNNGTTNAGNNGCTNNGCCNGCNGATCNGTT
CG

Query= MSMg01no465_a08.b1 MSMg01no465_a08.b1 CHROMAT_FILE:
MSMg01no465_a08.b1 PHD_FILE: MSMg01no465_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:57 2005
         (582 letters)



>mm_chr16_49435556_49436537
          Length = 982

 Score = 1077 bits (557), Expect = 0.0
 Identities = 572/577 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccactttgcgtttatcatcatatgctagagtgaaagggttgaaggaaatggagct 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaattccactttgagtttatcatcatatgctagagtgaaagggttgaaggaaatggagct 722

                                                                       
Query: 65  gtatcctgaacataattgtcagctcccacccactcattccgtttactcacccaccaattt 124
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 721 gtatcctgaacataattgtcagctcccacccactcattctgtttactcacccaccaattt 662

                                                                       
Query: 125 cctcatcaaaaaagtgagtagaaaattaatggcaataagtaggagaagccacagtgcctg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cctcatcaaaaaagtgagtagaaaattaatggcaataagtaggagaagccacagtgcctg 602

                                                                       
Query: 185 ttaaagcatttcatgcagatttagttcaggatagatgtacagttattctctggtaattaa 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 601 ttaaagcatttcatgcagatttagttcaggatagatgtacagttattctctgataattaa 542

                                                                       
Query: 245 catctggactgtggcatctacatactcactacactctcaatggcacagaaaaccaaattg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catctggactgtggcatctacatactcactacactctcaatggcacagaaaaccaaattg 482

                                                                       
Query: 305 tggaatttctaaggggacttagcatctcagccaacataacaacatgagaaggttcatagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggaatttctaaggggacttagcatctcagccaacataacaacatgagaaggttcatagt 422

                                                                       
Query: 365 gtcctagctagtgctaaaatagtttcctcttccagatttccaagttcttaatgttgataa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcctagctagtgctaaaatagtttcctcttccagatttccaagttcttaatgttgataa 362

                                                                       
Query: 425 ctcatcctgactgtagcatgaccttagatttagcatacagaaacaaacatctactggcag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcatcctgactgtagcatgaccttagatttagcatacagaaacaaacatctactggcag 302

                                                                       
Query: 485 aaatgttagacagctcaacgattattttgtgtttaaaattgtgttgataaccaataattt 544
           ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 301 aaatgttagacagctcaacgattattttgtgattaaaattgtgctgataaccaataattt 242

                                                
Query: 545 attgcatattgtcatggatctgaaaattgtatctctg 581
           |||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgcatattgtcatggatctgaaaattgtatctctg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)