Query= MSMg01no469_d10.b1 MSMg01no469_d10.b1 CHROMAT_FILE:
MSMg01no469_d10.b1 PHD_FILE: MSMg01no469_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:43 2005
(124 letters)
>mm_chr16_89839640_89840163
Length = 524
Score = 232 bits (120), Expect = 5e-66
Identities = 123/124 (99%)
Strand = Plus / Plus
Query: 1 aaaatactaagtattttagtaaatagtgtatttactaaatatatattctatattttacat 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaaatactaagtattttagtaaatagtgtatttactaaatgtatattctatattttacat 260
Query: 61 ataccatatggtgcatgtgtatatactacgactacaactactactaaaatactaagtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataccatatggtgcatgtgtatatactacgactacaactactactaaaatactaagtgct 320
Query: 121 aaaa 124
||||
Sbjct: 321 aaaa 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_d10.g1 MSMg01no469_d10.g1 CHROMAT_FILE:
MSMg01no469_d10.g1 PHD_FILE: MSMg01no469_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:43 2005
(353 letters)
>mm_chr16_90071541_90072295
Length = 755
Score = 540 bits (279), Expect = e-158
Identities = 328/345 (95%), Gaps = 3/345 (0%)
Strand = Plus / Minus
Query: 3 ccacatttggacttgcatcccatcctcaagatatctcaacgtgcatgtgaaatgcagtca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccacatttggacttgcatcccatcctcaagatatctcaacgtgcatgtgaaatgcagtca 401
Query: 63 gacctgggggcaaggggaagatgagtccgaaaagctgagcaccacaagggtggcgcttgc 122
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 400 gatctgggggcaaggggaagatgaatccgaaaagctgagcaccacaagggtggcacttgc 341
Query: 123 agtaccaaacattttgaccggggctactcagccactattgattattctggctccccagac 182
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agtatcaaacattttgaccggggctactcagccactattgattattctggctccccagac 281
Query: 183 tgtgggtaagggaggccaccgagcgactc--ggtctcagttcctggctcctttattatta 240
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 280 tgtgggtaagggaggccaccgagcgactcaggggctcagttcctggctcctttattatta 221
Query: 241 ttcttttatgtattcaggcacatttttttctttttaaatgctaggcatctaatccagggt 300
|||| ||||||||||| ||| |||||||||||||||||||||||| | |||||||||
Sbjct: 220 ttctcccatgtattcaggtaca-ttttttctttttaaatgctaggcaccaaatccagggc 162
Query: 301 ttccttggcaagcctccctacccctgagctaggcccccaagcccc 345
|||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 161 ttccttggcaagcccccctaccactgagctaggcccccaagcccc 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 755
Length adjustment: 9
Effective length of query: 344
Effective length of database: 746
Effective search space: 256624
Effective search space used: 256624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
