Query= MSMg01no469_f13.b1 MSMg01no469_f13.b1 CHROMAT_FILE:
MSMg01no469_f13.b1 PHD_FILE: MSMg01no469_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:54 2005
(565 letters)
>mm_chr16_27982355_27983319
Length = 965
Score = 994 bits (514), Expect = 0.0
Identities = 542/552 (98%)
Strand = Plus / Minus
Query: 14 ctcctttctgtgnagnaaagttaaaaagggagaaaggactgttaaacagcatttggttca 73
|||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 765 ctcctttctgtgtagtaaagttaaaaagggagaaaggactgttaaatagcatttggttca 706
Query: 74 atgcacagtataaaattaaagaggatatgaaaggtgctacatgtgttggccttctgctac 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atgcacagtataaaattaaagaggatatgaaaggtgctacatgtgttggccttctgctac 646
Query: 134 tgtatttcagtactatgtggctggagatactaagcgtactatgtactacccgaaaactgt 193
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 645 tgtatttcagtactatgtggctggagatactaagtgtactatgtactacccgaaaactgt 586
Query: 194 cataaaattgcacacttcagtatatttttgtatatgtatctaaaaatgtatttctctttt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cataaaattgcacacttcagtatatttttgtatatgtatctaaaaatgtatttctctttt 526
Query: 254 atgaattcagagcttgtttaaaacatcacgtagaggtactcaaaacaattacattttaat 313
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atgaattcagagcatgcagaaaacatcacgtagaggtactcaaaacaattacattttaat 466
Query: 314 tttaacagctgcacaaatgctggtgttgctatgctggcatgcatgctattgaataatgta 373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 465 tttaacagctgcacaaatgctggtgttgctatgctggcatgcatgctattgaataacgta 406
Query: 374 acgtctccagctgaatgccatctttagttttgaaggaattatttgcattatctcaagtct 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acgtctccagctgaatgccatctttagttttgaaggaattatttgcattatctcaagtct 346
Query: 434 actttaacccaaaataaactgaaatggaaaattgagttcaccattcctctcttttacttt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actttaacccaaaataaactgaaatggaaaattgagttcaccattcctctcttttacttt 286
Query: 494 ttctaattccgtgaagatggacaaacccttgaaacactgaaaagtcaaacatatatgcta 553
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 285 ttctaattccgtgaagatggacaaacccttcaaacactgaaaagtcaaacatatatgcta 226
Query: 554 atcttatcttta 565
||||||||||||
Sbjct: 225 atcttatcttta 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_f13.g1 MSMg01no469_f13.g1 CHROMAT_FILE:
MSMg01no469_f13.g1 PHD_FILE: MSMg01no469_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:54 2005
(499 letters)
>mm_chr16_27845677_27846575
Length = 899
Score = 397 bits (205), Expect = e-114
Identities = 247/267 (92%), Gaps = 13/267 (4%)
Strand = Plus / Plus
Query: 1 ttcatacagggtgagtgaggatgtttttgtaaacagacaaatagggaccaaaaattatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatacagggtgagtgaggatgtttttgtaaacagacaaatagggaccaaaaattatag 260
Query: 61 actgcagggtcggcagtatgaccttatatttccctttttataaaaccgtattgtctcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgcagggtcggcagtatgaccttatatttccctttttataaaaccgtattgtctcaaa 320
Query: 121 tatgtctgaaagacattgattttgtaactgcaatactgctgtccctgacctcaccatata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 321 tatgtctgaaagacattgattttgtaactgcaatactgctgtccctgacctcaccagaga 380
Query: 181 ctggtggtcaggatatatatataa-------ttgtgcttgctttaaaatgtttatgtctg 233
||||||||||||| ||||| | || ||||| ||||| |||||||||||||||||
Sbjct: 381 ctggtggtcaggagatataaaaaaaaaaaaattgtgtttgctataaaatgtttatgtctg 440
Query: 234 agattgcatatt-ctcctccatttttt 259
|| ||||||||| | |||||||||
Sbjct: 441 ag-ttgcatattac----ccatttttt 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
