Query= MSMg01no470_f24.b1 MSMg01no470_f24.b1 CHROMAT_FILE:
MSMg01no470_f24.b1 PHD_FILE: MSMg01no470_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:15 2005
(248 letters)
>mm_chr16_29248220_29248867
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 tcctcttaagacagattatctgctcttcacaggggacagacaggtaatggtcttaattta 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 448 tcctcttaagacagattatctgctcttcacaggggacagacagggaatggtcttgattta 389
Query: 61 ttctcatttttgtttctgctttgtcactgtaagaagtaaacaagatatgtcttgtcaacc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 388 ttctcatttttgtttctgctttgtcactgtaagaagtaaacaagatatatcttgtcaacc 329
Query: 121 accagctggaacaggttgaaagctgaagtcacctggtagtaattaaattatcttgtcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 accagctggaacaggttgaaagctgaagtcacctggtagtaattaaattatcttgtcact 269
Query: 181 tactaaataaagatttaaaaaaaatagcatagacagttttcataatgctggaaattcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tactaaataaagatttaaaaaaaatagcatagacagttttcataatgctggaaattcttc 209
Query: 241 catagtga 248
||||||||
Sbjct: 208 catagtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_f24.g1 MSMg01no470_f24.g1 CHROMAT_FILE:
MSMg01no470_f24.g1 PHD_FILE: MSMg01no470_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:16 2005
(391 letters)
>mm_chr16_29061877_29062667
Length = 791
Score = 632 bits (327), Expect = 0.0
Identities = 376/397 (94%), Gaps = 11/397 (2%)
Strand = Plus / Plus
Query: 1 aatatattaaactttgtttcatagtatggtagtaccttaaaaggtgttttagggactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 200 aatatattaaactttgtttcatagtatggtagtaccttaaaaggtgttttagggactgag 259
Query: 61 gagatggctcagtggttaaacgtgcatgctgttcctaaggggacctgagtttacaatcca 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 260 gagatggctcagtggttaaacgtgcatgctgttccaaaggggacctgagtttacaatcca 319
Query: 121 gtactcatgtcaagtgcctcgcagctgtttgttgttacactagctcaggtgctctgtctg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtactcatgtcaagtgccttgcagctgtttgttgttacactagctcaggtgctctgtctg 379
Query: 181 acgcctgtagagtctgtgagcacctgcaacttaatgcacacaacaaaacacatatccata 240
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 380 acgcctgtagagtctgtgagcacctgcatcttaatgaacacaacaaaacacatatccata 439
Query: 241 atttaaaactct-----tttttaaatctttttaa-aaagtctttgttaatgtatgtttat 294
||||||||| || | ||||||||| || |||||||||||||||||||||||||
Sbjct: 440 atttaaaacactaaaagt----aaatctttt-aacaaagtctttgttaatgtatgtttat 494
Query: 295 cttataacctttccaatataactatagtaatggaattctttttttttttaattgtcaatt 354
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 495 cttataacctttccaatacaactatagtaacggaattctttttttttttaattgtcaatt 554
Query: 355 tgcaggtcattgtggtacaggatcacttataccaagc 391
|||||||||||| ||||||||||||||||||||||||
Sbjct: 555 tgcaggtcattgcggtacaggatcacttataccaagc 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
