Query= MSMg01no470_i22.b1 MSMg01no470_i22.b1 CHROMAT_FILE:
MSMg01no470_i22.b1 PHD_FILE: MSMg01no470_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:30 2005
(241 letters)
>mm_chr16_38571644_38572286
Length = 643
Score = 435 bits (225), Expect = e-126
Identities = 238/243 (97%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1 aacttaagagatctgcctgcgtctgccttctgagtgctgggattaaaggtgagtgccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aacttaagagatctgcctgcgtctgccttctgagtgctgggattaaaggtgagtgccacc 447
Query: 61 accagcagcttcattcttcaagacttttaaggggctggggaagggaaaccctacctcagt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 446 accagcagcttcattcttcaagacttttaaggggctgggggagggaaaccctacctcagt 387
Query: 121 gacagagaaataacttggcatgtaccaattatctgggttagatctatagaatcacaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gacagagaaataacttggcatgtaccaattatctgggttagatctatagaatcacaaata 327
Query: 181 aaagag--ggggaaaaaatacctagttgggaggctagcttggtgggtaaagatgctaggt 238
|||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 326 aaagaggagggggaaaaatacctagttgggaggctagcttggtgggtaaaggtgctaggt 267
Query: 239 gcc 241
|||
Sbjct: 266 gcc 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 643
Length adjustment: 9
Effective length of query: 232
Effective length of database: 634
Effective search space: 147088
Effective search space used: 147088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_i22.g1 MSMg01no470_i22.g1 CHROMAT_FILE:
MSMg01no470_i22.g1 PHD_FILE: MSMg01no470_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:31 2005
(449 letters)
>mm_chr16_38372600_38373448
Length = 849
Score = 845 bits (437), Expect = 0.0
Identities = 447/451 (99%), Gaps = 2/451 (0%)
Strand = Plus / Plus
Query: 1 tttgaaccatattccataatcagtaaaaaaaaaaa--aaaacaaaaaaaactcagagctc 58
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 199 tttgaaccatattccataatcagtaaaaaaaaaaaacaaaaaaaaaaaaactcagagctc 258
Query: 59 agtaaaggttagcctcgaaggctgccttcaccactcacaaagacacacactgtagccctg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agtaaaggttagcctcgaaggctgccttcaccactcacaaagacacacactgtagccctg 318
Query: 119 tcagccagagggttgtatcaggcagaccagtcaaggttgtctaagtttattctcttttct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcagccagagggttgtatcaggcagaccagtcaaggttgtctaagtttattctcttttct 378
Query: 179 atactatctggggaaccatttcattttcatcttagctttgctgctcatctttggttttga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atactatctggggaaccatttcattttcatcttagctttgctgctcatctttggttttga 438
Query: 239 gacagcatcttactctgcagctcaggttaccctacaatcactatgtagcccaagctggct 298
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gatagcatcttactctgcagctcaggttaccctacaatcactatgtagcccaagctggct 498
Query: 299 tccagttctggtccactccttagtgcttataaggaaggcatgagccaccatccccagctc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tccagttctggtccactccttagtgcttataaggaaggcatgagccaccatccccagctc 558
Query: 359 atcatttgaacatggattatggagccctactgtgtgccaagtacatgctgctgccttttt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atcatttgaacatggattatggagccctactgtgtgccaagtacatgctgctgccttttt 618
Query: 419 gtcctgctggtgtaatctagtttgcatcctg 449
|||||||||||||||||||||||||||||||
Sbjct: 619 gtcctgctggtgtaatctagtttgcatcctg 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
