CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGACCATCCGCGGAA
TTCATTAAAAATTCCCAATCTCTATGTGTAAGGGCCGCAATGAAAGGAAA
AGAAAGCCTACCATGAGATCCAGAAAAAGGCACATGAATTNGTGTGGCTG
AAGACTAGCTTCGCAAAAACAGATTCTACCGGCCGACTAGGGGGAGAGGA
CACTACTAATAAGNNNNNNNNTANACGNNNNCNNNNTATCTACGTATTGA
NGCTTCGTATAAAANNAGGAGGAAAATCCTGGNNACTACAAATACAAGAT
CGAAAATTCAATCCACACCGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNN
CCCNNNNNNNNNNNNNNCNNNNNNNNNNNNACCCCCCCCAAACNCCNNAA
AAAAAANNNNTTCCCCAAAAAAAANNNNAACCCCCCAAAAAAACCCCAAA
ACTTTTTAAAAACCCCCCCCCTTTTTTTAAAAAACACCTTCCNCNAAAAC
CCCCCCTCTTTTCTTAAATAAAACTTCTCCCCAAAAAAAACCCCCCACCC
AAANCCCAAAAAAAATATATTTTTTCTTCACCAACCCACTTTCCCCCCTT
TACCTAACAATAAAAAAAACCAAAAGGGGGCCCCACCAACCCACAACAAA
CAAATTTTTTTTTTTTTCCCCCTCCTCTCCCCCCCCCCNAAAAAAAAAAA
AAAAACTATTTTTTCCCTCCCCCTTATTCCCACACCCCCCCCCCCCAAAA
AAACCCCCNCTTCCCTTTCTTCTCCTTCTCCTTCTCC

NACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAAACTCTATGTCCCATAGAAAG
ACAGGGCATCAAGTGGAGGGATGAGGTTGCCATCGCACAGTCAAAAACTC
TGACTCAGAATTGTTTCTCTCAAAAAGAACTGCAGGGACAAAAAATGGAG
AAGAGACAGAGGGAAAGGAGGTCCAGTGACAGGCCCAAATTAGGACCCAC
ATACTCTTTTATAAATCCTTCACTTGACACTTTATTAATATCCAATATTT
TAAGCCTGGTTGTTGTAACTGACAAAATCATTGTAAGTTCCAGTGCCTCT
ACAATTGCTTTGATCATTATCAAACACATGATAACCACCTGCAGTGCAAC
TGTATTCAGCATGACCTAGGCTGTCACCATAGTCATGAAGAGCGCTAAAA
TTTTCGCTACAAACAAAACAGTCTTGCCAGTAACTACATCCATAACCACT
ACCAACAATTCTAGAATGACTTTGACCTCTGTTTGGGTGAAGCACTAACC
ATCTCTTGATTCCTTGAGCTAGCTTCACTTCACAGTTCTGACCATTCACA
AGAGTTGGGTTACCGAATGTCAATCTTATCCACGTAGCTGTGGTTTATCA
CAGATTANCACAAAGCATGTTTTTGCCTGACATCAGTTTTCCCCTATGTT
TCAAATAACCTCATCTATGATAATTGATGGTCTTCAGGGCCTTCTTTTAC
AATTTTANGGGACTTAGTCATGAGAATCTCC

Query= MSMg01no471_o24.g1 MSMg01no471_o24.g1 CHROMAT_FILE:
MSMg01no471_o24.g1 PHD_FILE: MSMg01no471_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:22 2005
         (526 letters)



>mm_chr16_80475097_80476022
          Length = 926

 Score = 1009 bits (522), Expect = 0.0
 Identities = 525/526 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataaactctatgtcccatagaaagacagggcatcaagtggagggatgaggttgccatcgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaactctatgtcccatagaaagacagggcatcaagtggagggatgaggttgccatcgc 260

                                                                       
Query: 61  acagtcaaaaactctgactcagaattgtttctctcaaaaagaactgcagggacaaaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagtcaaaaactctgactcagaattgtttctctcaaaaagaactgcagggacaaaaaat 320

                                                                       
Query: 121 ggagaagagacagagggaaaggaggtccagtgacaggcccaaattaggacccacatactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagaagagacagagggaaaggaggtccagtgacaggcccaaattaggacccacatactc 380

                                                                       
Query: 181 ttttataaatccttcacttgacactttattaatatccaatattttaagcctggttgttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttataaatccttcacttgacactttattaatatccaatattttaagcctggttgttgt 440

                                                                       
Query: 241 aactgacaaaatcattgtaagttccagtgcctctacaattgctttgatcattatcaaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactgacaaaatcattgtaagttccagtgcctctacaattgctttgatcattatcaaaca 500

                                                                       
Query: 301 catgataaccacctgcagtgcaactgtattcagcatgacctaggctgtcaccatagtcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgataaccacctgcagtgcaactgtattcagcatgacctaggctgtcaccatagtcat 560

                                                                       
Query: 361 gaagagcgctaaaattttcgctacaaacaaaacagtcttgccagtaactacatccataac 420
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagagcgctaaaattttcactacaaacaaaacagtcttgccagtaactacatccataac 620

                                                                       
Query: 421 cactaccaacaattctagaatgactttgacctctgtttgggtgaagcactaaccatctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactaccaacaattctagaatgactttgacctctgtttgggtgaagcactaaccatctct 680

                                                         
Query: 481 tgattccttgagctagcttcacttcacagttctgaccattcacaag 526
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgattccttgagctagcttcacttcacagttctgaccattcacaag 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)