Query= MSMg01no472_g22.b1 MSMg01no472_g22.b1 CHROMAT_FILE:
MSMg01no472_g22.b1 PHD_FILE: MSMg01no472_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:04 2005
(502 letters)
>mm_chr16_8951802_8952703
Length = 902
Score = 891 bits (461), Expect = 0.0
Identities = 484/499 (96%), Gaps = 12/499 (2%)
Strand = Plus / Minus
Query: 4 gaattcaatccttgcaccccaatgattggaagaagagatgacttggtgtatattttatgt 63
||||||||||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 751 gaattcaatccctggaccccaatggttggaagaagagatgacttggtgt----------- 703
Query: 64 catattttatgtcatactttatgacaacaaacctagcttcttaaagctgtgacttaagga 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 -atattttatgtcatactttatgacaacaaacctagcttcttaaagctgtgacttaagga 644
Query: 124 aacacatctagtgacccacttcctccaaacagaccccttcacagaccactcagtatgaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aacacatctagtgacccacttcctccaaacagaccccttcacagaccactcagtatgaat 584
Query: 184 gcaaggctataactagttgacaaagttagcatccttagattcaatcacttctcaacagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gcaaggctataactagttgacaaagttagcatccttagattcaatcacttctcaacagcc 524
Query: 244 aactgccagggaccaagcctgcaccacaagaacctactgagcccaaaccttagtactcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aactgccagggaccaagcctgcaccacaagaacctactgagcccaaaccttagtactcct 464
Query: 304 ggagcaaaagaaaaaagctttatgtgtccttccaattcacaaagtcctttgaggtttaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggagcaaaagaaaaaagctttatgtgtccttccaattcacaaagtcctttgaggtttaaa 404
Query: 364 agcattgatcttttgagcctaactctgaccctatgagagggagatgggtcctactgagag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agcattgatcttttgagcctaactctgaccctatgagagggagatgggtcctactgagag 344
Query: 424 atggggaaatgggtttagcgggcttacggaaatgcctatgttacccaggactctctagca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atggggaaatgggtttagcgggcttacggaaatgcctatgttacccaggactctctagca 284
Query: 484 gaacagaacagaaagaatg 502
|||||||||||||||||||
Sbjct: 283 gaacagaacagaaagaatg 265
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_g22.g1 MSMg01no472_g22.g1 CHROMAT_FILE:
MSMg01no472_g22.g1 PHD_FILE: MSMg01no472_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:04 2005
(433 letters)
>mm_chr16_8822185_8823017
Length = 833
Score = 814 bits (421), Expect = 0.0
Identities = 430/433 (99%)
Strand = Plus / Plus
Query: 1 tgaccccaactctgaagtcagcaggtttcttctccaggaagggcgtccttactaagggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaccccaactctgaagtcagcaggtttcttctccaggaagggcgtccttactaagggac 260
Query: 61 tctgcaaagccaggtacagctttaggtggagagtagtccctactttagagcccttgctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgcaaagccaggtacagctttaggtggagagtagtccctactttagagcccttgctag 320
Query: 121 ggctgctgcctctctggccataagaccttacaaatttcagagatttaagaactcatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctgctgcctctctggccataagaccttacaaatttcagagatttaagaactcatttgg 380
Query: 181 gagcagggcacttgggttagctaccctagcatttggacggcagatgcagaatggccgcaa 240
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 381 gagcagggcacttgggttagctaccctagcatttgggcggcagatgcagaatggccacaa 440
Query: 241 gtttgtgcttacttgtgcattctgggctagtcagggctagagtgagctcttgcttgaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttgtgcttacttgtgcattctgggctagtcagggctagagtgagctcttgcttgaacc 500
Query: 301 agtcagtcagtcatcaatcatttggaatagcagaaagtggtcttcatatgtcgcaatccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcagtcagtcatcaatcatttggaatagcagaaagtggtcttcatatgtcgcaatccc 560
Query: 361 agcactgggaaggtagaagcaggatgaacaaaaattccaaacaatcctaggcaacaagaa 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcactgggaaagtagaagcaggatgaacaaaaattccaaacaatcctaggcaacaagaa 620
Query: 421 acacagcttcaaa 433
|||||||||||||
Sbjct: 621 acacagcttcaaa 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
