Query= MSMg01no482_e18.b1 MSMg01no482_e18.b1 CHROMAT_FILE:
MSMg01no482_e18.b1 PHD_FILE: MSMg01no482_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:11 2005
(661 letters)
>mm_chr16_69337134_69338201
Length = 1068
Score = 555 bits (287), Expect = e-162
Identities = 313/325 (96%), Gaps = 7/325 (2%)
Strand = Plus / Minus
Query: 5 gaattctcaagtttacggatgatttcattgtgcctatatttctatttttctgccttttct 64
|||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 gaattctcaagtgtagggatgatttcattgtgcctacatttctatttttctgccttttct 266
Query: 65 tgggctcttttccttttg------ttgttg-ttttttgttgttgttgttcaaatataact 117
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 265 tgggctcttttccttttgttgttcttgttgtttttttgttgttgttgttcaaatataact 206
Query: 118 gtttttattttatatgtaattaattaaataattaattatttatttgtacatcctgattgc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtttttattttatatgtaattaattaaataattaattatttatttgtacatcctgattgc 146
Query: 178 agttcatcccttctctgagccctccttccatctcacccttgctcatccacttctcctttt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agttcatcccttctctgagccctccttccatctcacccttgctcatccacttctcctttt 86
Query: 238 ctcttcacaaaaggaagacacctccatgaatatcaaccatccatagcatatcatcttgca 297
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 85 ctcttcacaaaaggaagacacctccatgaatatcaaccagccatggcatatcatcttgca 26
Query: 298 gtacaactatggactaggtgcatct 322
|||||||||||||||||||||||||
Sbjct: 25 gtacaactatggactaggtgcatct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1068
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1058
Effective search space: 688758
Effective search space used: 688758
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_e18.g1 MSMg01no482_e18.g1 CHROMAT_FILE:
MSMg01no482_e18.g1 PHD_FILE: MSMg01no482_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:11 2005
(666 letters)
>mm_chr16_69251036_69252101
Length = 1066
Score = 1272 bits (658), Expect = 0.0
Identities = 664/666 (99%)
Strand = Plus / Plus
Query: 1 cagaaagatattttatttttctgagaaggcaaatttttagacagttaatttttaattgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaagatattttatttttctgagaaggcaaatttttagacagttaatttttaattgta 260
Query: 61 tcattcactaatgagaaaatttaatttttaaaatatgaattaccaaatcctgttatatat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattcactaatgagaaattttaatttttaaaatatgaattaccaaatcctgttatatat 320
Query: 121 ttgcattagtatctggatacttccaatttatttaaaagtttggaattttagtaaagcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcattagtatctggatacttccaatttatttaaaagtttggaattttagtaaagcaac 380
Query: 181 agattacctatatgaatatagcatgaatctaattttaattagtacaattgagaaactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattacctatatgaatatagcatgaatctaattttaattagtacaattgagaaactgtg 440
Query: 241 tgtttaccaatttcactttgtaacactgaagaaaccataaggtttagcctaccattttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttaccaatttcactttgtaacactgaagaaaccataaggtttagcctaccattttaa 500
Query: 301 atttatatgagttctttaactattcagaaggttttatttgctaattagacaattggaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttatatgagttctttaactattcagaaggttttatttgctaattagacaattggaata 560
Query: 361 cttaaaaagaaattgaatatattaaatttatgagtgcagcttaaaatgttgaaggtgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttaaaaagaaattgaatatattaaatttatgagtgcagcttaaaatgttgaaggtgttt 620
Query: 421 aattaaccatttgtaaatggtaccaaacattattcaaaaacctattaaaataggtgtaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattaaccatttgtaaatggtaccaaacattattcaaaaacctattaaaataggtgtaaa 680
Query: 481 aacttactagatttagaaatataatattcatatgtagagcttaaaagcttaaggaagaac 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacttactagttttagaaatataatattcatatgtagagcttaaaagcttaaggaagaac 740
Query: 541 tagtttcaggatttgttactttaataaattgaatattaatttttaaaaccaaagtaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagtttcaggatttgttactttaataaattgaatattaatttttaaaaccaaagtaaact 800
Query: 601 ctaaataaacctttggaacataaaaacctcctttgagaacataatgaatttcacagctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctaaataaacctttggaacataaaaacctcctttgagaacataatgaatttcacagctat 860
Query: 661 tcacaa 666
||||||
Sbjct: 861 tcacaa 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
