Query= MSMg01no482_m22.b1 MSMg01no482_m22.b1 CHROMAT_FILE:
MSMg01no482_m22.b1 PHD_FILE: MSMg01no482_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:47 2005
(634 letters)
>mm_chr16_46388569_46389601
Length = 1033
Score = 1191 bits (616), Expect = 0.0
Identities = 628/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 1 ttaatttcccttaatagcactcagtagatctatgaagcccagggttacacacagtttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ttaatttcccttaatagcactcagtagatctatgaagcccagggttacacacagtttttc 772
Query: 61 aactgaatggacaccattgttttggttttcagtgctttttttcaaggaacaatcaggatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 771 aactgaatggacaccattgttttggttttcagtgctttttttcaaggaacaataaggatt 712
Query: 121 ttaaatccactcgagtgtattgatgaaactaaattaaattcctctctgaaatcgtacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttaaatccactcgagtgtattgatgaaactaaattaaattcctctctgaaatcgtacaaa 652
Query: 181 cagccccagcattcattatattttaactagaggcagcagaggtttgttctgcaagtacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cagccccagcattcattatattttaactagaggcagcagaggtttgttctgcaagtacta 592
Query: 241 gtttactccagggcacagtacagctcagccacacctctgtactctcacatattctcgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gtttactccagggcacagtacagctcagccacacctctgtactctcacatattctcgaca 532
Query: 301 taagtgcaaaattcccttaaattccctcgcttcagtgcccagacgactgtccagcatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 taagtgcaaaattcccttaaattccctcgcttcagtgcccagacgactgtccagcatctt 472
Query: 361 gggtttcactgaatactaaaaaaatcccaattcctttgtaaaagacctatattaagcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gggtttcactgaatactaaaaaaatcccaattcctttgtaaaagacctatattaagcagc 412
Query: 421 aggtattgccgctagatcccctattgttccatttgtctctaaaggttcctatcacccctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aggtattgccgctagatcccctattgttccatttgtctctaaaggttcctatcacccctc 352
Query: 481 tcccttctgctcctagctctaagctagtgctatccaattttccatctccagcccatttgc 540
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 351 tcccttctgctcctagctctaagctagtgctatccaacattccatctccagcccatttgc 292
Query: 541 tcagtctccatgtggtcctcgcctcttaacatgtctgcttggcagctctgtcccttcgag 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 291 tcagtctccatgtggtcctcgcctcttaacatgtctgcttggcagctctg-cccttcgag 233
Query: 601 ccagcggttctctgtctcacaaggctgcactg 632
||||||||||||||||||||||||||||||||
Sbjct: 232 ccagcggttctctgtctcacaaggctgcactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space: 638352
Effective search space used: 638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_m22.g1 MSMg01no482_m22.g1 CHROMAT_FILE:
MSMg01no482_m22.g1 PHD_FILE: MSMg01no482_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:47 2005
(323 letters)
>mm_chr16_46224083_46224805
Length = 723
Score = 609 bits (315), Expect = e-179
Identities = 321/323 (99%)
Strand = Plus / Plus
Query: 1 cacagtgggctttaaaataatttattagcacagaaactcttatagaatgtcagagaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cacagtgggctttaaaataatttattagcacagaaactcttatagaatgccagagaggta 260
Query: 61 aaaatattccgcatttcttctttttattaattgataattccatatatgtattttatgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatattccgcatttcttctttttattaattgataattccatatatgtattttatgtac 320
Query: 121 atgcatatgaatatgtatatatatacatacatatatgatacttatgtgtatgttatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcatatgaatatgtatatatatacatacatatatgatacttatgtgtatgttatatgt 380
Query: 181 atgatatgtgtatatatgtatatatgtttatgtgtatatttgtatatgtgcatatgcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgatatgtgtatatatgtatatatgtttatgtgtatatttgtatatgtgcatatgcata 440
Query: 241 tatgtactattatttatgcatatatgtgtgcatatgtatatttgtgtgtatatatgtgta 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgtactattatatatgcatatatgtgtgcatatgtatatttgtgtgtatatatgtgta 500
Query: 301 tatgtgaatataagtgtatatcc 323
|||||||||||||||||||||||
Sbjct: 501 tatgtgaatataagtgtatatcc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
