Query= MSMg01no484_m22.b1 MSMg01no484_m22.b1 CHROMAT_FILE:
MSMg01no484_m22.b1 PHD_FILE: MSMg01no484_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:30 2005
(599 letters)
>mm_chr16_62807175_62808174
Length = 1000
Score = 1048 bits (542), Expect = 0.0
Identities = 572/582 (98%), Gaps = 1/582 (0%)
Strand = Plus / Plus
Query: 19 aattgtttccttcattggctcggatcattgcaaaacctccacagcttgggtatttgccat 78
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 219 aattgtttccttcattggctcggagcattgcaaaacctccacagcttgcttatttgccat 278
Query: 79 gcctgcagcctcgcaggctgagggctctgaagcagcatggactgcctggccactccacat 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gcctgcagcctcgcaggctgagggctctgaagcagcatggactgcctggccactccacat 338
Query: 139 actgctgagggtccgtccatgcgctgctgtaaagtgctcttggcagccagactttggccc 198
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 actgctgagggtccatccatgcgctgctgtaaagtgctcttggcagccagactttggccc 398
Query: 199 cacctctgctacacatataacaaagcctgtagagtcaccactaattaacctgtgtggcag 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cacctctgctacacatataacaaagcctgtagagtcaccactaattaacctgtgtggcag 458
Query: 259 gaaacagctggggagcagcctggatactgacctacattgttagggcggaagcagtgggga 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gaaacagctggggagcagcctggatactgacctacattgttagggcggaagcagtgggga 518
Query: 319 ctgacaagtggtttcagctacaactcacacctggtggactccgttagaatacccacaggg 378
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 519 ctgacaagtggtttcagctacaactcacacctggtggactccattagaatacccacaggg 578
Query: 379 agtcagttccaatcccaggactttggctgacagggctgttaagttttttcctcttctaat 438
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 579 agtcagttccaatcccaggactttggctgacagggctgttaggttttttcctcttctaat 638
Query: 439 tatgttaacttactgttgtattctttaactggatcttttgtctttttcctaatctatgct 498
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 639 tatgttaacttactgttgtattctttaactggatcttttgtctttttcctcatctatgct 698
Query: 499 attttttt-aagtctttaatcctctattacttttagtccctgaatttttctgactcctta 557
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tttttttttaagtctttaatcctctattacttttagtccctgaatttttctgactcctta 758
Query: 558 acctattagttcactgaaagctactttcactttcctcttctg 599
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 759 accttttagttcactgaaagctactttcactttcctcttctg 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_m22.g1 MSMg01no484_m22.g1 CHROMAT_FILE:
MSMg01no484_m22.g1 PHD_FILE: MSMg01no484_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:30 2005
(687 letters)
>mm_chr16_62967570_62968656
Length = 1087
Score = 499 bits (258), Expect = e-145
Identities = 288/298 (96%), Gaps = 2/298 (0%)
Strand = Plus / Minus
Query: 391 ggtgtcctttccgggtaaaggt-actaagtgcctttaattacagcacttagtagacagaa 449
||||||||| || |||| ||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 1067 ggtgtccttgccaggtagtggtgactca-tgcctttaattacagcacttagtagacagaa 1009
Query: 450 gcaagtagatctctgagttcaaggtcagcatggtctacagaatgagttccaggacagtca 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 gcaagtagatctctgagttcaaggtcagcatggtctacagaatgagttccaggacagtca 949
Query: 510 caactaggcaggaaaaccctatcttgaaacaaataagcaaacaaacaaacaaacaatcaa 569
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 948 caactaggcagcaaaaccctatcttgaaacaaataagcaaacaaacaaacaaccaatcaa 889
Query: 570 aaagatgtcctgaggagaaaataggaccttagcagtttaaaaaaatgttatgacagtaca 629
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 888 aaagatgtcctgaggagaaaataggatcttagcagtttaaaaaaatgttatgacagtaca 829
Query: 630 tccatttatgcatgtatttttgtcatcctggtacatgccacattctatatgtgcacca 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tccatttatgcatgtatttttgtcatcctggtacatgccacattctatatgtgcacca 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
