Query= MSMg01no486_a07.b1 MSMg01no486_a07.b1 CHROMAT_FILE:
MSMg01no486_a07.b1 PHD_FILE: MSMg01no486_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:11 2005
(651 letters)
>mm_chr16_80719113_80720164
Length = 1052
Score = 1114 bits (576), Expect = 0.0
Identities = 633/652 (97%), Gaps = 3/652 (0%)
Strand = Plus / Plus
Query: 1 gttagatcttagaactgaaaggatattgtttcactaagaaaactacttcaagtaaagaga 60
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gttagatcttagaactcaaaggatattgtttcactaagaaaactgtttcaagtaaagaga 260
Query: 61 atagacatttctctagtgattattctattatttaaactctatctagtttacaagcgtttc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 atagacatttctctggtgattattctattatttaaactctatctagtttacaagcatttc 320
Query: 121 agtatgttttcagttctcaaagtaatgccatcaattgactttaccaaactctatcttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtatgttttcagttctcaaagtaatgccatcaattgactttaccaaactctatcttatt 380
Query: 181 aaccagtagctggcagaggagcagatatgtctgaagtcacgttcctcaaaaacagaatga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aaccagtagctggcagaggagcagatatgtctgaagtcacgttcctcaaaaacagaatca 440
Query: 241 atgttgggattttcatatcacgattttccaaaagctctcaagaagatattacaaggcagt 300
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtagggattttcatatcacgattttccaaaagctctcaagaagatattacaaggcagt 500
Query: 301 gactgctacatgaatggtatacataaatgacaaggacagggtgtgatttaaatgaaggct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gactgctacatgaatggtatacataaatgacaaggacagggtgtgatttaaatgaaggat 560
Query: 361 aggcttacctgatgacacaggtcattcaaggcagagtctgcactgccaattaaaggcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggcttacctgatgacacaggtcattcaaggcagagtctgcactgccaattaaaggcaac 620
Query: 421 tgaaatcagacattgagacagtgggtaatgacgctttgtgtgggtgtttacattatgaat 480
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 621 tgaaatcagacattgagacagtgggtactgacactttgtgtgggtgtttacattatgaat 680
Query: 481 gagattccccgaaccccaggtgaaaggagacaacatgctcctgagtgttag-ttctgctc 539
|||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 681 gagattccccgaaccccaagtgaaaggagacaacatgctcctgagagttagcttctgctc 740
Query: 540 tggggaggagaagtagacgggg-catttcccccctcaccacacatagacaagtaataaac 598
||||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 741 tggggaggagaagtaga-ggggacatttcccccctcaccacacatatacgagtaataaac 799
Query: 599 acaatgtagaaatcaaaactaaactgagcaccaccgacagaagcttcctgag 650
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 800 acaatgtagaaatcaaaactaaaccgagcaccaccgacagaagcttcctgag 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_a07.g1 MSMg01no486_a07.g1 CHROMAT_FILE:
MSMg01no486_a07.g1 PHD_FILE: MSMg01no486_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:11 2005
(674 letters)
>mm_chr16_80784315_80785388
Length = 1074
Score = 1139 bits (589), Expect = 0.0
Identities = 613/621 (98%)
Strand = Plus / Minus
Query: 54 caggagagatttcgtataaagtgtgattcttaggaaggtaagatggctcacttaataagg 113
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 caggagagatttcatataaagtgtgattcttaggaaggtaagatggctcacttaataagg 1015
Query: 114 gtaccatcatcaaggctgagaatctgagttggattccagtgacccacacctggaaacaga 173
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gaaccatcatcaaggctgagaatctgagttggattccagtgacccacacctggaaacaga 955
Query: 174 gaactgacattttcaaatcttctcactcccaccatacaatgatgtatgtgctttcataca 233
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 gaactgacattttcaaatcgtctcactcccaccatacaatgatgtatgtgctttcataca 895
Query: 234 catacatacatgccatatttataattagtaaaatatcttgaaatagtaggaatcctgctt 293
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 catacatacatgccataacaataattagtaaaatatcttgaaatagtaggaatcctgctt 835
Query: 294 attgcaagaaaaacttttagactttatcttgaaactcctcaaagatataaatttaataaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 attgcaagaaaaacttttagactttatcttgaaactcctcaaagatataaatttaataaa 775
Query: 354 tgcactcaaaagtcaaatctaatttttatttagtttttttgaagaatatattattacttc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tgcactcaaaagtcaaatctaatttttatttagtttttttgaagaatatattattacttc 715
Query: 414 aataaagaataaagaacataatatcatggttattcctagcagacagaaataattccactt 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 714 aataaagaataaagaacataatatcatggttattcctagcagacagaaataattacactt 655
Query: 474 atagatgtgaaaatgtaattgaggaaggagtcaccataaaggcagctacagacataaaga 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atagatgtgaaaatgtaattgaggaaggagtcaccataaaggcagctacagacataaaga 595
Query: 534 acaattggaaattcttactaagtaatgttgtttaatttcgaatctactcccaagttttta 593
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 594 acaattggaaattcttactaagtaatgttgtttaatttcgaatctactcccaaattttta 535
Query: 594 atttagttaattcagtattaagtatggatgaaagactttgatctcagacatcttccttca 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atttagttaattcagtattaagtatggatgaaagactttgatctcagacatcttccttca 475
Query: 654 agcataacatagtagtgatag 674
|||||||||||||||||||||
Sbjct: 474 agcataacatagtagtgatag 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
