Query= MSMg01no489_d19.b1 MSMg01no489_d19.b1 CHROMAT_FILE:
MSMg01no489_d19.b1 PHD_FILE: MSMg01no489_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:24 2005
(598 letters)
>mm_chr16_11047165_11048165
Length = 1001
Score = 1096 bits (567), Expect = 0.0
Identities = 590/599 (98%), Gaps = 3/599 (0%)
Strand = Plus / Plus
Query: 1 actcatgccggacagctgataatgagaa---aagccaaaacctcaagtagtgtgcagaca 57
|||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||
Sbjct: 201 actcatgccggacagctgataatgaggagtcaagccagaacctcaagtagtgtgcacaca 260
Query: 58 ttccctggaagctcttgaaaggaacaagtgtggctggtttgggtgcgtgctagaggtagg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccctggaagctcttgaaaggaacaagtgtggctggtttgggtgcgtgctagaggtagg 320
Query: 118 gacgactgctggcatgcatgctttctcctggattcatgctgagaaagacagaaaaagaga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacgactgctggcatgcatgctttctcctggattcatgctgagaaagacagaaaaagaga 380
Query: 178 agagaaataagatgagatttcaccagaagatataattgacagagagccttaggtccaaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagaaataagatgagatttcaccagaagatataattgacagagagccttaggtccaaaa 440
Query: 238 tgttaccaaaaatcactttagaatattttctctcatgagagaaaaaagacaaggaaagat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttaccaaaaatcactttagaatattttctctcatgagagaaaaaagacaaggaaagat 500
Query: 298 tgataaacttgaacaagatatgggaagacagaaagctgacttcaaagccgggaaaagccc 357
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 tgataaacttgaacaagatatgggaagacagaaaactgacttcaaagccgggaaaagccc 560
Query: 358 agtgatcagcggtctcctgagctgactggggaccgtgatgaggagtcagatgatacacgt 417
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 561 agtgatcagcggtctcctgagctgactggggaccgtgatgaggactcagatgatacccgt 620
Query: 418 tacagccaggggccagacagtaccgaggttgatggttctgtgcgtgcagtgacgcagact 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacagccaggggccagacagtaccgaggttgatggttctgtgcgtgcagtgacgcagact 680
Query: 478 tatgcctgcatgttccaaaggatgtagaaggacaggtttcactgtagccagtcctgaaag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatgcctgcatgttccaaaggatgtagaaggacaggtttcactgtagccagtcctgaaag 740
Query: 538 attcagcacacatatttcagataaagacaaaaacaagttaagagaagtttctggaactc 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attcagcacacatatttcagataaagacaaaaacaagttaagagaagtttctggaactc 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 1001
Length adjustment: 10
Effective length of query: 588
Effective length of database: 991
Effective search space: 582708
Effective search space used: 582708
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_d19.g1 MSMg01no489_d19.g1 CHROMAT_FILE:
MSMg01no489_d19.g1 PHD_FILE: MSMg01no489_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:24 2005
(612 letters)
>mm_chr16_11214777_11215788
Length = 1012
Score = 872 bits (451), Expect = 0.0
Identities = 460/463 (99%)
Strand = Plus / Minus
Query: 1 acatacttcatggtctgagatgtggcaatccagatagctgtcttgcaagaggcaatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acatacttcatggtctgagatgtggcaatccagatagctgtcttgcaagaggcaatgaaa 404
Query: 61 gttctcttaccttctgtgacctcatagcccagaaaagagacccccattttacaaagttga 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 403 gttctcttaccttctgtgacctcatagcccaaaaaagagacccccattttacaaagttga 344
Query: 121 ggctgtttctttgagacatattattccagtgtctggagttacttgattaggtccttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggctgtttctttgagacatattattccagtgtctggagttacttgattaggtccttggtg 284
Query: 181 tcatcaagcagctagtggaggtcaggtgaaggtcatccacatattggagcaagattgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcatcaagcagctagtggaggtcaggtgaaggtcatccacatattggagcaagattgaat 224
Query: 241 tatgttaagatagccataagttagttctcaacctgtgggtccaaacagctggggggtggg 300
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tagggtaagatagccataagttagttctcaacctgtgggtccaaacagctggggggtggg 164
Query: 301 taggatggtcctttcacagggattgtatatcagatattctgaatatcagatatttatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 taggatggtcctttcacagggattgtatatcagatattctgaatatcagatatttatgat 104
Query: 361 gcataacattactgaagttaacagttatgaaggagcaaaacaataacgttatggttgtgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gcataacattactgaagttaacagttatgaaggagcaaaacaataacgttatggttgtgg 44
Query: 421 ggttgttaccacctgaggaactgtattgaatgtcgcagcatta 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ggttgttaccacctgaggaactgtattgaatgtcgcagcatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
