Query= MSMg01no492_d09.b1 MSMg01no492_d09.b1 CHROMAT_FILE:
MSMg01no492_d09.b1 PHD_FILE: MSMg01no492_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:22 2005
(392 letters)
>mm_chr16_74861082_74861873
Length = 792
Score = 696 bits (360), Expect = 0.0
Identities = 384/392 (97%)
Strand = Plus / Plus
Query: 1 agacattgaaaagaatgcctgaccaagggaaagctcaaatgagttcaaatgtcacaaaga 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 agacattgaaaagaatgcctgaccaagggaaatctcaaatgagttcaaatgtcacaaaga 260
Query: 61 ggaggctgtaattattagaaaacaacatgctggatacatatttctcctaaaagcacagtc 120
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |
Sbjct: 261 ggaggctgtaattattagaaaacaacatgctggatgcatatttcccctaaaagcacagcc 320
Query: 121 gtggggttttctggaaatagaagcagcgtggttgttttcacagctcctctctcctcttct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggggttttctggaaatagaagcagcgtggttgttttcacagctcctctctcctcttct 380
Query: 181 cagagatattgcacgttgccccttcttcatctcacctgcatcttgtctcatggtggtgtt 240
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 381 cagagatattgcacgttgccccttcttcatctcacctgcgtcttgtctcatgatggtgtt 440
Query: 241 tatttatttgctggtagcagctttattttagtttccctgctgagttggtgttaaaacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttatttgctggtagcagctttattttagtttccctgctgagttggtgttaaaacaaa 500
Query: 301 ttactctaatatactttcctaagggaagtcaattttgtcttttcccatctaaaggataaa 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 ttactctaatatactttcctaagggaagtcaatttagtcttttcccatctaaaggataaa 560
Query: 361 gatagaaatggtttaataaatttattttcagg 392
||||||||||||||||||||||||||||||||
Sbjct: 561 gatagaaatggtttaataaatttattttcagg 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_d09.g1 MSMg01no492_d09.g1 CHROMAT_FILE:
MSMg01no492_d09.g1 PHD_FILE: MSMg01no492_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:22 2005
(572 letters)
>mm_chr16_74978502_74979470
Length = 969
Score = 1007 bits (521), Expect = 0.0
Identities = 558/571 (97%), Gaps = 3/571 (0%)
Strand = Plus / Minus
Query: 1 ttttatttgtttgatgatattcctatagatttggaaatctgagggaatacagaatgaagg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttttatttgtttgacgatattcctatagatttggaaatctgagggaatacagaatgaagg 709
Query: 61 tacaaatgggtgaaagagaaaatttccagaagagttcataaacactaataaagaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tacaaatgggtgaaagagaaaatttccagaagagttcataaacactaataaagaaataaa 649
Query: 121 aatcagatcaaagaaacagtaatatgttttagagattttcagaacagcatggttgggagc 180
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct: 648 aatcagatcaaagaaacagtaatatgttttagagagattcggaacagcatggttgggcgc 589
Query: 181 agaaatagatcataactctcagtaaaaaaaagagacccaatggaaagcatgtttggcaaa 240
| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 588 a-aaatagatcataactctcagt--aaaaaagagacccagtggaaagcatgtttggcaaa 532
Query: 241 gggttaattttgttgtctattttccttttattctttaagattgaaattatcatgaaatga 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 531 gggttaattttgttgtctattttccttttattctttgagattgaaattatcatgaaatga 472
Query: 301 taattattattatataaaacggggttatgttaatgaaaagaaaaagaaaccatggagtat 360
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 471 taattattattatatagaacggggttatgttaatgaaaagaaaaagaaaccatggaatat 412
Query: 361 aagaacagatgagcaaaaattaggaaaaattaaagaaaatgtgaatgtggtcatcttcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aagaacagatgagcaaaaattaggaaaaattaaagaaaatgtgaatgtggtcatcttcag 352
Query: 421 ggaccaggtaggaagaaatatccctgagattttgatgaatcggaggtggatgcatagtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggaccaggtaggaagaaatatccctgagattttgatgaatcggaggtggatgcatagtta 292
Query: 481 ctgatgtgtgggacgaataggaaggttagtgtgaatgtgagaaacagaagcttggtgaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ctgatgtgtgggacgaataggaaggttagtgtgaatgtgagaaacagaagcttggtgaga 232
Query: 541 ggtagaggaagggttatactttatcagaggg 571
|||||||||||||||||||||||||| ||||
Sbjct: 231 ggtagaggaagggttatactttatcaaaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 969
Length adjustment: 10
Effective length of query: 562
Effective length of database: 959
Effective search space: 538958
Effective search space used: 538958
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
