Query= MSMg01no493_a08.b1 MSMg01no493_a08.b1 CHROMAT_FILE:
MSMg01no493_a08.b1 PHD_FILE: MSMg01no493_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:24 2005
(698 letters)
>mm_chr16_84745288_84746385
Length = 1098
Score = 741 bits (383), Expect = 0.0
Identities = 418/433 (96%), Gaps = 6/433 (1%)
Strand = Plus / Plus
Query: 272 tcaatctcttctttac------atatatgtatttagtaaacaagttccatgccatggcat 325
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 466 tcaatctcttctttacatatatatatatatatttagtaaacaagttccatgccatggcat 525
Query: 326 gcatgtggaagccagaaggcagctagctagcaggaaatggttctttccttcccacccaag 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gcatgtggaagccagaaggcagctagctagcaggaaatggttctttccttcccacccaag 585
Query: 386 aggctctgtggactaaactcaggctttgtggcaagtgtccttacccactggtccatctct 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aggctctgtggactaaactcaggctttgtggcaagtgtccttacccactggtccatctct 645
Query: 446 ctgtcccctagttcagtcttcacaggtttctatcatgttattaaatcttctggctaaaac 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ctgtcccctagttcagtcttcacaggtttctatcatgttattaaatcttctggctaaaac 705
Query: 506 agcacctgttccttccaaaatggataggcatttctgcctatatcttttaaagcaggcaaa 565
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agtacctgtcccttccaaaatggataggcatttctgcctatatcttttaaagcaggcaaa 765
Query: 566 ttggatagatgagtggtgagaatgctgaccttggaaaagccttcccactggcattcatct 625
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 766 ctggatagatgagtggtgagaatgctgaccttggaaaagccttccctctggcattcatct 825
Query: 626 ttgcagttcctctaggagtgtggcgctgctttgagttctgagggagagtcagttcttgtg 685
||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 826 ctgcagttcctctaggagtgcggtgctgctttgagttctgagggagagtcagttctcgtg 885
Query: 686 aattcaatttgga 698
|||||||||||||
Sbjct: 886 aattcaatttgga 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_a08.g1 MSMg01no493_a08.g1 CHROMAT_FILE:
MSMg01no493_a08.g1 PHD_FILE: MSMg01no493_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:24 2005
(246 letters)
>mm_chr16_84923712_84924358
Length = 647
Score = 439 bits (227), Expect = e-128
Identities = 242/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 cataatccag-aaaaaatagtaaaactatttaccactaaataaaatttgttcaccactaa 59
|||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 392 cataatccagaaaaaaatagtaaaaatatttaccactaaataaaatttgttcgccactaa 333
Query: 60 aaagtcacctacgctgaaaaatgaaaaggaaaaatcatataatcaataacctctccacag 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaagtcacctacactgaaaaatgaaaaggaaaaatcatataatcaataacctctccacag 273
Query: 120 actgtgaatcagccctgcgccattctccaggtgagaactctggtgagaacccagtattaa 179
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 272 actgtgaatcagccctgcgccattctccaggtgagaactcgggtgagaacccagtattaa 213
Query: 180 ccttggaagtaaggaagggagggaaagggaggggaagagagagaaggcagaaggggggag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ccttggaagtaaggaagggagggaaagggaggggaagagagagaaggcagaaggggggag 153
Query: 240 gggaggg 246
|||||||
Sbjct: 152 gggaggg 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
