Query= MSMg01no494_p01.b1 MSMg01no494_p01.b1 CHROMAT_FILE:
MSMg01no494_p01.b1 PHD_FILE: MSMg01no494_p01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:54 2005
(666 letters)
>mm_chr16_6774713_6775778
Length = 1066
Score = 1288 bits (666), Expect = 0.0
Identities = 666/666 (100%)
Strand = Plus / Plus
Query: 1 gaatttcttggtctggaaatggagcttagtggtacagtaggtgccctggcttcactctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaatttcttggtctggaaatggagcttagtggtacagtaggtgccctggcttcactctct 260
Query: 61 gtcatttcaaataaaacaaaacttttaaaagccttagacaatttttcaatgtataacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcatttcaaataaaacaaaacttttaaaagccttagacaatttttcaatgtataacaaa 320
Query: 121 agctcttttgtaatgtttcaaatatgttcatcaatttatatgtacatatatttagatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctcttttgtaatgtttcaaatatgttcatcaatttatatgtacatatatttagatata 380
Query: 181 aataattatgagtaaaacatagacacataaaactagaaagaaacagatagattttgttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataattatgagtaaaacatagacacataaaactagaaagaaacagatagattttgttcc 440
Query: 241 attgtgtgttttgctttcaaattcacagttctccacggttaatatcacttcgagctgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtgtgttttgctttcaaattcacagttctccacggttaatatcacttcgagctgaca 500
Query: 301 tcaaactcaaaattatctgggcattcctatctcccaaattaaataatcatgtattttaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaaactcaaaattatctgggcattcctatctcccaaattaaataatcatgtattttaag 560
Query: 361 agatagcaattgcttttaaattccagagatatgggattcaatttccttttctaatgaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatagcaattgcttttaaattccagagatatgggattcaatttccttttctaatgaaac 620
Query: 421 aaaaatctacatagagtatatttaaatttcttgaaagagttcatttaataggtctgaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaatctacatagagtatatttaaatttcttgaaagagttcatttaataggtctgaagt 680
Query: 481 ggtctcagcaaaatccacaacttaaagatacagttggagcctccattgaaaataagttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtctcagcaaaatccacaacttaaagatacagttggagcctccattgaaaataagttga 740
Query: 541 acttccaagagagaaatgggtgcagatctgagttcatttgtacagaataacattgcacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttccaagagagaaatgggtgcagatctgagttcatttgtacagaataacattgcacca 800
Query: 601 gcaatcaactttaagttaatgttaacaattataatgtgtatcctttaattgttgaatttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcaatcaactttaagttaatgttaacaattataatgtgtatcctttaattgttgaatttt 860
Query: 661 gaatcg 666
||||||
Sbjct: 861 gaatcg 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_p01.g1 MSMg01no494_p01.g1 CHROMAT_FILE:
MSMg01no494_p01.g1 PHD_FILE: MSMg01no494_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:54 2005
(557 letters)
>mm_chr16_6973336_6974292
Length = 957
Score = 1065 bits (551), Expect = 0.0
Identities = 553/554 (99%)
Strand = Plus / Minus
Query: 1 ccagatgttgtcattgtccctgagacacacatcataaataaaagaaaagctgagagttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ccagatgttgtcattgtccctgagacacacatcataaataaaagaaaagctgagagttca 649
Query: 61 gtgggccagtaccttgcacgaaggtcatgggccttgttgaaatggcagagtactacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gtgggccagtaccttgcacgaaggtcatgggccttgttgaaatggcagagtactacagaa 589
Query: 121 cagccgggcactcaggatgctggctataaacacatcccaaatagttcagccaatttgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cagccgggcactcaggatgctggctataaacacatcccaaatagttcagccaatttgtgc 529
Query: 181 tccagggcaaagtggactttggagattttcagaatgatcatcataataaccaccacccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tccagggcaaagtggactttggagattttcagaatgatcatcataataaccaccacccat 469
Query: 241 tgatctcatttaacaagcactgatctagggctcatgccatccaagccctcatatccatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tgatctcatttaacaagcactgatctagggctcatgccatccaagccctcatatccatca 409
Query: 301 gcagagttgcttttatgaacgagataggctgagagcaaaatacaagtcagtgtaaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcagagttgcttttatgaacgagataggctgagagcaaaatacaagtcagtgtaaagaat 349
Query: 361 gaatggagttgttaggagatgagtgagcagagagtaaagaagaggtgactttagctgcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gaatggagttgttaggagatgagtgagcagagagtaaagaagaggtgactttagctgcga 289
Query: 421 tagaaataaattataaggaggtcaagatgccatgagaagcaaaggataaggctgggaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tagaaataaattataaggaggtcaagatgccatgagaagcaaaggataaggctgggaagg 229
Query: 481 tttatcacagtcagactttcanaaaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tttatcacagtcagactttcagaaaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 169
Query: 541 gtgtacatgcatac 554
||||||||||||||
Sbjct: 168 gtgtacatgcatac 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
