GCTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTAGGAATTAT
TTTCTCTTATATTTCTTACAGAACCAGGTAGTATTGAAATGGAATTCAGT
AAATTCAGTAAAATATATTAGTTTTCTTTTGATCCACCATGGAATTATTA
TTATTATGTTTTCTGTGTTTAGTTATGAAGACCAACCAAAGACAACACGT
TTGAATTTAAAATCTGTGAAAGAACCAGTAGGAAGCTTGCTCCTGTTTCT
GTGTATGTATGAGATTGCCCAGGGTGTCCGGGCAGGGCTTTGGGGAATAG
AACTGATGCCCTGTAAAAACTAAAGAAGCTAACAAGGCAGTATCCTGGCC
AATTTTTCCCATCACTATCAGAATAAATAGTTGCATTTGTATAAAAACCA
AGTTTCCAAAGGAAGTAATTTCATGTAGAATATTTACTTTTAAAATCTCC
CTTCATTCAAACTCAGAATTGTTTAGAATAATTAGAGGGAAAGAAGATGG
TAAATTGCTGAAATTTAGTTTTAATCACTGTTTTTAGAAAAATGATGTGA
TTAAGTTAATGCAATTGCACAAGAAAACACTGGCTTGTATTTCTAAAGTC
ATGCAGTAAACAATGAAAAGAGAGAGGGATGAAGGCAGATATTATATGTG
CTATAAATATGTAAGCATTGCCAAGGAGGCTTAAGGTGAGAATGAGCCCT
AGGTTCAAGAAATAGCCAAAATCGATATGAGAAAATGTTTTCATTTGCAA
GTTTATT

TCTGGCGGCCGCCTGGCTTCAGTCATCTGNNTGACCTATAGAAGGGATTC
TGAGATTGCGGGGCCAGGAAGGGGGAGTGAGTGGGTTGGTGAGCGGAGGG
CAGGGGGTAAAGGGGTTTGGGGAGGNGNNTTTCCNNNNCCCCCCCTTTTT
TCGGGGGGCGGTTCCTTTTTCCCTTCCTCCCCCCCCCTTCCTTTTCCTCT
TGTTTCCCCCTGCCCCCCTTTCTTCGCCTCTCCTCCTTTTCGCTCGCCCC
CTCTTCCTCTCCCCCCCTCTTTTCTCCTTTCTCTCCCCCTTCCCCCCCTC
CCTTTTTTTTTCCCCTTCTGCCTCCCCCCTCCCTTCCTTCCTTTTTTTTT
TTTTTCCCCTTCTTTGTGCGGGGTGCCCTCCTCTTTCTCTCCCCCTCCTC
CCCCCCTCCCTTTTCTTTTCTTTTCTTCTCCCCCCTTCTCCTCTCCTCTT
CTTTTTCCCCCCTCCTTCTTTCTTTTCTTCCTCCTTTTTCCTTTTCTCCC
CCCCTATTTCCTTCTCTTCCCTCCCCTTCCTCTTCTCCCTTCCTCTTTTT
CCCCTTTCCCTCTCTCCCCCCCTTCCCTTTCTCTTTCCTTTTCCCCCCCT
CTCCTTTTCCTTTTCCCTTCCCCTTGCTCCCTTCGCTCCCTTCCTTCTCC
CTCTTTTTCCCTTTCTTCCCCCCCTCTCCCTGCCCGTTGTTTTTCCTTTT
TTCTCTTCCCCTTTTCGTCCCTTTTTCTTCCCTTTTCTATTTTCCTTTTC
TTCCCTTCTTGTTCCTCTCCTTCTTCTCTTCCCCCCCTTTTTCCCCCCTT
CTTTTCCCTTTCCCCTTTTTTTCTTTC

Query= MSMg01no494_p19.b1 MSMg01no494_p19.b1 CHROMAT_FILE:
MSMg01no494_p19.b1 PHD_FILE: MSMg01no494_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:57 2005
         (704 letters)



>mm_chr16_40869379_40870480
          Length = 1102

 Score = 1282 bits (663), Expect = 0.0
 Identities = 691/701 (98%), Gaps = 4/701 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttaggaat-tattttctcttatatttcttacagaaccaggtagtattgaaatgg 63
           ||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 902 gaattcttaggaataaattttctcttatgtttcttacagagccaggtagtattgaaatgg 843

                                                                       
Query: 64  aattcagtaaattcagtaaaatatattagttttcttttgatccaccatggaattattatt 123
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 842 aattcagtaaattcagtaaaatatattagttttctcttgatccaccatggaattattatt 783

                                                                       
Query: 124 attatgttttctgtgtttagttatgaagaccaaccaaagacaacacgtttgaatttaaaa 183
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 782 attatgttttctgtgtttagttatgaagaccaaccaaagaca--acgtttgaatttaaaa 725

                                                                       
Query: 184 tctgtgaaagaaccagtaggaagcttgctcctgtttctgtgtatgtatgagattgcccag 243
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 724 tctgtgaaagaaccagtaggaagcttgttcctgtttctgtgtatgtatgagattgccca- 666

                                                                       
Query: 244 ggtgtccgggcagggctttggggaatagaactgatgccctgtaaaaactaaagaagctaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggtgtccgggcagggctttggggaatagaactgatgccctgtaaaaactaaagaagctaa 606

                                                                       
Query: 304 caaggcagtatcctggccaatttttcccatcactatcagaataaatagttgcatttgtat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 caaggcagtatcctggccaatttttcccatcactatcagaataaatagttgcatttgtat 546

                                                                       
Query: 364 aaaaaccaagtttccaaaggaagtaatttcatgtagaatatttacttttaaaatctccct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaaaaccaagtttccaaaggaagtaatttcatgtagaatatttacttttaaaatctccct 486

                                                                       
Query: 424 tcattcaaactcagaattgtttagaataattagagggaaagaagatggtaaattgctgaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcattcaaactcagaattgtttagaataattagagggaaagaagatggtaaattgctgaa 426

                                                                       
Query: 484 atttagttttaatcactgtttttagaaaaatgatgtgattaagttaatgcaattgcacaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atttagttttaatcactgtttttagaaaaatgatgtgattaagttaatgcaattgcacaa 366

                                                                       
Query: 544 gaaaacactggcttgtatttctaaagtcatgcagtaaacaatgaaaagagagagggatga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaaaacactggcttgtatttctaaagtcatgcagtaaacaatgaaaagagagagggatga 306

                                                                       
Query: 604 aggcagatattatatgtgctataaatatgtaagcattgccaaggaggcttaaggtgagaa 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aggcagatattatatgtgctataaatatgtaagcattgccaaggaggcttaaggtgagaa 246

                                                    
Query: 664 tgagccctaggttcaagaaatagccaaaatcgatatgagaa 704
           ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 245 tgagccctaggttcaagaaatagccaaaatcgataagagaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1102
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1092
Effective search space:   757848
Effective search space used:   757848
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)