Query= MSMg01no496_d17.b1 MSMg01no496_d17.b1 CHROMAT_FILE:
MSMg01no496_d17.b1 PHD_FILE: MSMg01no496_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:30 2005
(256 letters)
>mm_chr16_40128148_40128802
Length = 655
Score = 439 bits (227), Expect = e-128
Identities = 249/257 (96%), Gaps = 3/257 (1%)
Strand = Plus / Minus
Query: 1 gaatttataattccatttcttgcctaagaaaggtgagcaaaaaagctttatagagacaac 60
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 455 gaatttataatttcatttcttgccaaagaaaggtgagcaaaaaagctttatagagacaac 396
Query: 61 tattgagaaaatctttatgttccaacactaaaatgagcaagtgacccattcctaactcta 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tattgagaaaatcattatgttccaacactaaaatgagcaagtgacccattcctaactcta 336
Query: 121 agtggagaaacacttcaatggcaagctatttctcacttggccattcagagaaaaaaaaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 335 agtggagaaacacttcaatggcaagctatttctcacttggccattcagag--aaaaaact 278
Query: 181 aacaacatgtattcttggagacaactatgattgttt-aaaaaaatccttctttaaaaatt 239
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 277 aacaacatgtattcttggagacaactatgattgtttaaaaaaaatccttttttaaaaatt 218
Query: 240 tatttatcttatatgtg 256
|||||||||||||||||
Sbjct: 217 tatttatcttatatgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 655
Length adjustment: 9
Effective length of query: 247
Effective length of database: 646
Effective search space: 159562
Effective search space used: 159562
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no496_d17.g1 MSMg01no496_d17.g1 CHROMAT_FILE:
MSMg01no496_d17.g1 PHD_FILE: MSMg01no496_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:30 2005
(196 letters)
>mm_chr16_39989685_39990280
Length = 596
Score = 364 bits (188), Expect = e-105
Identities = 194/196 (98%)
Strand = Plus / Plus
Query: 1 ttgtactgcttttattcttcatcatttgagaacatctgactgtccacatgagcagcatta 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtactgcttttattcttcagcatttgagaacatctgactgtccacatgagcagcatta 260
Query: 61 gtttaaaacttaggtagaaaatgtagccccatggcctttccataggatcacgtaagagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttaaaacttaggtagaaaatgtagccccatggcctttccataggatcacgtaagagta 320
Query: 121 cctctctttgcttttgaattgctgtctggtaaaatagcggtaaaactctcatgtgagcct 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctctctttgcttttgaattgctatctggtaaaatagcggtaaaactctcatgtgagcct 380
Query: 181 catttttctgattagt 196
||||||||||||||||
Sbjct: 381 catttttctgattagt 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
