Query= MSMg01no497_p02.b1 MSMg01no497_p02.b1 CHROMAT_FILE:
MSMg01no497_p02.b1 PHD_FILE: MSMg01no497_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:48 2005
(320 letters)
>mm_chr16_21191648_21192367
Length = 720
Score = 594 bits (307), Expect = e-174
Identities = 316/319 (99%)
Strand = Plus / Plus
Query: 2 acgtgtgcattttaatgggggttcttttacagcggttctaatgctccgtggatagtctgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 202 acgtgtgcattttaatgggggttcttttacagcggttctaatgctccgtggattgtctgg 261
Query: 62 ggccgtgagggttgttctctcaagttgtaaactcgctgctactggttccgccttcttctg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggccgtgagggttgttctctcaagttgtaaactcgctgctactggttccgccttcttctg 321
Query: 122 agtctgctctacaaggagttgggggtgtggtgcatgtgcagggtatgcacgcactgttta 181
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 agtctgctctacaaggagttgggggtgtggtgcatgcgcagggtatgcacgcactgttta 381
Query: 182 tttggaaaagcttgattacgtttggaatcacctaggagacacattttgagatttgtgagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttggaaaagcttgattacgtttggaatcacctaggagacacattttgagatttgtgagg 441
Query: 242 gtgtttctagagaggtttaagtgaggaggaaacacactgattgtgggtagcaccatcaaa 301
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 442 gtgtttctagagaggtttaagtgaggaggaaacacactggttgtgggtagcaccatcaaa 501
Query: 302 tggacaatggtcccagacc 320
|||||||||||||||||||
Sbjct: 502 tggacaatggtcccagacc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_p02.g1 MSMg01no497_p02.g1 CHROMAT_FILE:
MSMg01no497_p02.g1 PHD_FILE: MSMg01no497_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:48 2005
(562 letters)
>mm_chr16_21395656_21396616
Length = 961
Score = 971 bits (502), Expect = 0.0
Identities = 547/562 (97%), Gaps = 1/562 (0%)
Strand = Plus / Minus
Query: 1 attttgattaggcctctcacagcaaacgaccttgtctggtactgacctacattacccatc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 761 attttgattaagcctctcacagcaaacgaccttgtctggtactgacctaca-tacccatc 703
Query: 61 cgtaagacaaagcccaaacaggatgggtaacaactttcaggccgctcctctatgtcctga 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 cataagacaaagcccaaacaggatgggtaacaactttcaggccgctcctctatgtcctga 643
Query: 121 gtagctcagccttctgctaggagcatgccagagggttgtgacctcattgattttttagtc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 642 gtagctcagccttctgctaggagcatgccagagggttgtgacctcattgactttttagtc 583
Query: 181 atggggtcacttcccttagcctcctgctagactcactcccagctgcaaactggactttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 582 atggggtcacttcccttagcctcctgctagactcactcccagctgcaaactggacccaca 523
Query: 241 tttttaacagacacctggggaacaactgctggtgacccatatgttttgtggtcaggccca 300
| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 522 ggtctaacagacacctggggaacaactgctggtgacccagatggtttgtggtcaggccca 463
Query: 301 gcctgcaacaaaaaagacattgcataaaaccgaagacagccctatcaagctggccaggga 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 462 gcctgcaacaaaaaagacattgcataaaaccgaagacagtcctatcaagctggccaggga 403
Query: 361 ggcagttaagcagggtctcagttcagtgtctgagaggctctgcctggggctgcaggggtc 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 402 ggcagttaagcagggtctcagttcagtctctgagaggctctgcctggggctgcaggggtc 343
Query: 421 agctggacccagggacccgcaactcaacagcaatgccttaatatgcccttggacagaccc 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agctggacccagggacccacaactcaacagcaatgccttaatatgcccttggacagaccc 283
Query: 481 cctggtcctctgctagtcagcatcagaaagagcatcctacacagactagaatgattcagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctggtcctctgctagtcagcatcagaaagagcatcctacacagactagaatgattcagc 223
Query: 541 gtggaggggcagatgtgcagga 562
||||||||||||||||||||||
Sbjct: 222 gtggaggggcagatgtgcagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 961
Length adjustment: 10
Effective length of query: 552
Effective length of database: 951
Effective search space: 524952
Effective search space used: 524952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
