NGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACACAACTTTGTCCAAAAGGCTAAACGCCTCCAAGCTGCAG
TGTCCAAGGTCATCCTTAGCTACACAGTAAGCCCAAGGCTAGCCTGGGCA
TCGAAGGATGGTGGTGGGTTGTGGATGAAGAAGGAGAAAGGGAGAGAGGG
TAANANNNNNTNNNTNNTTNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTT
TTTTTTTTCTTTGNNTTTTTTTTTTTTTTNNNNNTTTTTTTTTTTTTTTT
TTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGTTTTTGTTTTTTTC
TTTTTTTTTTTTTTTTTTCCCCCCTTTTTTTTTCTCTGTTTTCTTTTTGT
TTTTCCGTTTCGTTCCCTTTTCTTTTTTTTCTCTCCTTTTTTCTCCATCC
TTCTCTCCTTTTCTCTTGTTGCTTTTTTTCTTTTCTTTTTTTCGCTTTTT
TTTTCCTTTTCTTTTTTTATTCCTCTTTCTTTCCTCTTCTCCTTTCTTTC
TCTTTTCTTCTTCCCCCCTCCGTTATTCTTTCTTTTTATTTTTCTCTTCC
CTTCTTTCTACTATTTTTCTCTTCGCCTTTTTTTCTATTCTACTATTCTT
TTCTTTGTTTTTCTCTTTCCTCTTTTTCCCTTCTCTCTTTCTATTTCTTT
ATTTTTGTTTTCATTATGCATTTTCTTTTGTATCTATTTTCTTCTTATTC
TTTTTCGTTTTTCATCTGTCTTCTTTTATTTATTTCGTTTTCCCCTTTTT
TTGCCGCCACATTCTGTTTTATCTCTACTTTCTTTCCTCG

CATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTCTTTACTCAAATGAATCTTTCCTAG
TACCAAAGCCCCAGCTAATAATGTACATTCTTCTGGATCCCTCTACCTAC
TCCTCAAGGGTTATACAGCCCTTGTCACTCCGGAATAAAGAGAGCTGCTG
TTTCACAAAATATCATCTCAGAGACTTATTTCACTGAATATCACCTAGAA
GAGCTTCTTCTCTGGCCCTCCTCCACAAAAAAAGGAGCTGTAACACTGCA
AGCCATCAAGAAGAAGGCCAGGCCGAGGTCCAGCAAACCCACGTCCAGTC
AAGTTTTGTCCTTTCATTTCAGCTACTTCACAATACCAGCTGAATACACT
GAGGGCAGAAGCAGAGCCAGGCCACACCCCAGGGTTGGCTTTCTCCTCTT
CCCATATTTTTTCTCACTTCCTCTCTGGCACAAGCTGGGATCTTCCCAAG
AAAGACTTTGTGTACAGGTTCTATCTCAGGCTGCATTGTTCATTTTAGGT
GATGGGTTACTTACATATCACGGTGATAAAGTACTAACAGAAACAACATA
GGGCAGGAAGGATTTATTTTCTCATGGATTTAATCCATTATCATGAGGAG
GCTGTGGAGGAATACTGCAGTTCTTTGCATGGAAAGAAAGCTTCTGCCTA
AGGACATTCANGCACCAATGCACGGGGGCCAGAATGAAAAGAACAGAGCT
TGACATGGCAGTGGATTTGN

Query= MSMg01no498_e18.g1 MSMg01no498_e18.g1 CHROMAT_FILE:
MSMg01no498_e18.g1 PHD_FILE: MSMg01no498_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:16 2005
         (577 letters)



>mm_chr16_9207827_9208804
          Length = 978

 Score = 1048 bits (542), Expect = 0.0
 Identities = 569/578 (98%), Gaps = 1/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctctttactcaaatgaatctttcctagtaccaaagccccagctaataatgtacattcttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctttactcaaatgaatctttcctagtaccaaagccccagctaataatgtacattcttc 260

                                                                       
Query: 61  tggatccctctacctactcctcaagggttatacagcccttgtcactccggaataaagaga 120
           |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 261 tggatccctctagctactcctcaagggttatacagcccttgtcactccgaaataaagcga 320

                                                                       
Query: 121 gctgctgtttcacaaaatatcatctcagagacttatttcactgaatatcacctagaagag 180
            ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 actgctgtttcacaaaatatcatctcagagacctatttcactgaatatcacctagaagag 380

                                                                       
Query: 181 cttcttctctggccctcctccacaaaaaaa-ggagctgtaacactgcaagccatcaagaa 239
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 cttcttctctggccctcctccacaaaaaaagggagctgtaacactgcaagccatcaagaa 440

                                                                       
Query: 240 gaaggccaggccgaggtccagcaaacccacgtccagtcaagttttgtcctttcatttcag 299
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaggccaggccgaggtccagcaaacccacgtccagtcaagttttgtcctttcatttcag 500

                                                                       
Query: 300 ctacttcacaataccagctgaatacactgagggcagaagcagagccaggccacaccccag 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 ctacttcacaataccagctgaatacactgagggcagaagcagagccaggccacacccctg 560

                                                                       
Query: 360 ggttggctttctcctcttcccatattttttctcacttcctctctggcacaagctgggatc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttggctttctcctcttcccatattttttctcacttcctctctggcacaagctgggatc 620

                                                                       
Query: 420 ttcccaagaaagactttgtgtacaggttctatctcaggctgcattgttcattttaggtga 479
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 ttcccaagaaagactttgtgtacaggttctgtctcaggctgcattgttcattttaggtga 680

                                                                       
Query: 480 tgggttacttacatatcacggtgataaagtactaacagaaacaacatagggcaggaagga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgggttacttacatatcacggtgataaagtactaacagaaacaacatagggcaggaagga 740

                                                 
Query: 540 tttattttctcatggatttaatccattatcatgaggag 577
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttattttctcatggatttaatccattatcatgaggag 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 978
Length adjustment: 10
Effective length of query: 567
Effective length of database: 968
Effective search space:   548856
Effective search space used:   548856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)