Query= MSMg01no501_h24.b1 MSMg01no501_h24.b1 CHROMAT_FILE:
MSMg01no501_h24.b1 PHD_FILE: MSMg01no501_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:21 2005
(385 letters)
>mm_chr16_75891594_75892381
Length = 788
Score = 685 bits (354), Expect = 0.0
Identities = 376/384 (97%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 5 gaattctctttcctttgcactagggaaaaacaaatttcagggtttttt--ttt-atataa 61
||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 413 gaattctctttccattgaactagggaaaaacaaatttcagggtttttttctttaatataa 354
Query: 62 atatagactactaatttagcatccttttgatgagtgttgggatttaccggtttctgggta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atatagactactaatttagcatccttttgatgagtgttgggatttaccggtttctgggta 294
Query: 122 aaatattacaatgaatgtatagtacattcatatgttagtattcatattcatatgttagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaatattacaatgaatgtatagtacattcatatgttagtattcatattcatatgttagca 234
Query: 182 tattcacacgtcattctggcattgacatttagaaatgtgattgctatgacaaaatacaaa 241
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tattcacaagtcattctggcattgacatttagaaatgtgattgctatgacaaaatacaaa 174
Query: 242 tatatatgaaaacttaccagatgttgccaaatttccctccacagatgttgtgccatttta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tatatatgaaaacttaccagatgttgccaaatttccctccacagatgttgtgccatttta 114
Query: 302 caagtgatttactaaatatattacaagggttatatacttcatttagctgtggtggagctg 361
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 113 caagtgatttactaaatatattacaagggttgtatacttcatttagctggggtggagctg 54
Query: 362 ggattgaacatagagccttgcaca 385
||||||||||||||||||||||||
Sbjct: 53 ggattgaacatagagccttgcaca 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 788
Length adjustment: 9
Effective length of query: 376
Effective length of database: 779
Effective search space: 292904
Effective search space used: 292904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_h24.g1 MSMg01no501_h24.g1 CHROMAT_FILE:
MSMg01no501_h24.g1 PHD_FILE: MSMg01no501_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:21 2005
(362 letters)
>mm_chr16_75724284_75725045
Length = 762
Score = 600 bits (310), Expect = e-176
Identities = 350/364 (96%), Gaps = 4/364 (1%)
Strand = Plus / Plus
Query: 1 atgctgtaattctgtcaaccttcagggtggtaggcattgtcagaaggatgacataggggg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgctgcaattctgtcaaccttcagggtggtaggcattgtcagaaggatgacataggggg 260
Query: 61 cctttctagaaagacatctagtgacccctggcagtgtctctttactaggacccaatctca 120
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 cctttctagaaagatgtctagtgactcctggcagtgtctctttactaggacccaatctca 320
Query: 121 gaggttgaaattggtggggctccagaggtgaacctgtttcatagagagcatgaagttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggttgaaattggtggggctccagaggtgaacctgtttcatagagagcatgaagttgag 380
Query: 181 gccaaatatgtttgtgtgtccactggatacttttggggttgtctaataactggtgatcat 240
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccaaatatgtttgtatatccactggatacttttggggttgtctaataactggtgatcat 440
Query: 241 ctgtttttgccataacatgtgc--ctgtgaactaggaataatgctggggaggagaaccaa 298
|||||||| ||||||| | ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 441 ctgttttttccataac-t-tgcacctgtgaactaggaataatgctggggaggagaatcaa 498
Query: 299 acataatctcaaaaggtttaagtcccacctgatacggggagttcaaaatcctataaagag 358
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 499 acataatctcaaaaggtttaagtcccacctgatatggggagttcaaaatcttataaagag 558
Query: 359 ctga 362
||||
Sbjct: 559 ctga 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
