Query= MSMg01no503_j07.b1 MSMg01no503_j07.b1 CHROMAT_FILE:
MSMg01no503_j07.b1 PHD_FILE: MSMg01no503_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:54 2005
(141 letters)
>mm_chr16_35423908_35424450
Length = 543
Score = 234 bits (121), Expect = 2e-66
Identities = 137/143 (95%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 1 acagtctgatattcagattgagagactcaactacagctctttagccaggccagttacaat 60
||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 343 acagtctgatagtcagattgagagattcaactatagctctttagccaggccagttacaat 284
Query: 61 ctgacatcgagtaagcaaagcaaccaaaggctttgc--cgctcgctcactctctggagac 118
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 283 ctgacatcgagtaagcaaagcaaccaaaggctttgccgcgctcgctcgctctctggagac 224
Query: 119 cagcgagactgaggcttttaggg 141
|||||||||||||||||||||||
Sbjct: 223 cagcgagactgaggcttttaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 543
Length adjustment: 8
Effective length of query: 133
Effective length of database: 535
Effective search space: 71155
Effective search space used: 71155
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no503_j07.g1 MSMg01no503_j07.g1 CHROMAT_FILE:
MSMg01no503_j07.g1 PHD_FILE: MSMg01no503_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:54 2005
(344 letters)
>mm_chr16_35270774_35271517
Length = 744
Score = 642 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Plus
Query: 1 acagtgggagagtacactgcggtgtccttggtctcagaaagtggcaattcgacgtgtggt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcgggagagtacactgcggtgtccttggtctcagaaagtggcaattcgacgtgtggt 260
Query: 61 ctaacgatgtcactctggccaaccacatggaagctggtggcaaggcggggtaagtggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaacgatgtcactctggccaaccacatggaagctggtggcaaggcggggtaagtggggg 320
Query: 121 caggggaggtgcaggtagagacccaaaattcctttcctactcactctctctcagaagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggggaggtgcaggtagagacccaaaattcctttcctactcactctctctcagaagagg 380
Query: 181 ctgtcatgatgtgggcctggaggaggcaggaagaggagcagacacactggagcagatggc 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtcatgatgtgggactggaggaggcaggaagaggagcagacacactggagcagatggc 440
Query: 241 attaatagagtttgtgtgtgcgagcacacacacaagtgcacaaggagggaatggggaggg 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attaagagagtttgtgtgtgcgagcacacacacaagtgcacaaggagggaatggggaggg 500
Query: 301 ggctgtgagtgtagcttaaccaacctaatatgcataagatcctg 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggctgtgagtgtagcttaaccaacctaatatgcataagatcctg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
