Query= MSMg01no504_i20.b1 MSMg01no504_i20.b1 CHROMAT_FILE:
MSMg01no504_i20.b1 PHD_FILE: MSMg01no504_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:11 2005
(590 letters)
>mm_chr16_92997281_92998270
Length = 990
Score = 1089 bits (563), Expect = 0.0
Identities = 581/587 (98%)
Strand = Plus / Plus
Query: 4 ggaattccagtttctgaaagaacaaaacgaaaacaacaacaacaaacaaacaaacaaaac 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagttcctgaaagaacaaaacgaaaacaacaacaacaaacaaacaaacaaaac 263
Query: 64 ccagaaaaaacaaacaaacaacaacaacaacaacaagattatgctatgctttgcaggttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccagaaaaaacaaacaaacaacaacaacaacaacaagattatgctatgctttgcaggttg 323
Query: 124 ccgaaatacatctgctctactttcaatcatttttagattacttataacatctaaggtaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccgaaatacatctgctctactttcaatcatttttagattacttataacatctaaggtaaa 383
Query: 184 ttgagcatggatgacaacagttgtcacactgaattgtttgggaaatgatgacaaggaaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgagcatggatgacaacagttgtcacactgaattgtttgggaaatgatgacaaggaaag 443
Query: 244 aatccacccagaagtatatagtcagcatagcagctgaaatagaaccctaggctggttaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatccacccagaagtatatagtcagcatagcagctgaaatagaaccctaggctggttaaa 503
Query: 304 ctcccagatgcaatgtgatagagagatgtaaagaacagaggacatggggcagaatgtgtg 363
|||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 504 ctcccagatgcaatatgatagagagatgtgaagaacagaggacgtggggcagaatgtgtg 563
Query: 364 acagacaccatttagtgggcaatggactttaacctcatgggtctatagaatgttatgttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acagacaccatttagtgggcaatggactttaacctcatgggtctatagaatgttatgttt 623
Query: 424 tagcaaacaaggcagcagcgtgtcttctcagagctggggtctgatctcagctaatgacaa 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 tagcaaacaaggcagcagcgtgtcttctcagagctggggtctgatctcagctaacgacaa 683
Query: 484 tgttccacgcagaagccatgccaacacacagcaggacacagggctctgctcagccgtctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgttccacgcagaagccatgccaacacacagcaggacacagggctctgctcagccgtctc 743
Query: 544 tccagctaatatctactctcaggccctctggatgctttttatgtaga 590
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 744 tccagctaatatctactcacaggccctctggatgctttttatgtaga 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_i20.g1 MSMg01no504_i20.g1 CHROMAT_FILE:
MSMg01no504_i20.g1 PHD_FILE: MSMg01no504_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:11 2005
(483 letters)
>mm_chr16_93177430_93178313
Length = 884
Score = 760 bits (393), Expect = 0.0
Identities = 430/451 (95%), Gaps = 15/451 (3%)
Strand = Plus / Minus
Query: 1 tgcctctcccaggggcatctccctaacttctttgagatagaccacacatctttaaaacag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 451 tgcctctcccaggggcatctccctaacatctttgagatagaccacacatctttaaaacag 392
Query: 61 tgacgataataactattccagcctacaaagttttggtgaaaaccgatagaggatcaccac 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 391 tgacgataataactattccagcctacaaagttttggtgaaaactgatagaggatcaccac 332
Query: 121 acttgaaatttatttgtagtttattcttcacctggttccatttagtccaaaagatgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acttgaaatttatttgtagtttattcttcacctggttccatttagtccaaaagatgtatg 272
Query: 181 atttaatgaaatcttagtgcttatttgcatataatacatttttt-cctttggaccattct 239
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 271 atttaatgaaatcttagtgcttatttgcatatattacatttttttcctttggaccattct 212
Query: 240 aaaaaaaaaaa--------------cacttgtatgattttttaagattcctttaacataa 285
||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 211 aaaaaaaaaaaaaaacccaaaaaaacacttgtatgattttttaagattcctttgacataa 152
Query: 286 ataaaaatgagaagcatacaagccactctgctaggtacaccaagtgtctttcctgatatt 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 151 ataaaaatgagaagcatacaagccactctgctaggtacaccaagtgtctttcctgatagt 92
Query: 346 gtatgctatattctgctcaaaaaaatatgggagaatcagaagggaaggagagaaaaacag 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gtatgctatattctgctcaaaaaaatatgggagaatcagaagggaaggagagaaaaacag 32
Query: 406 atgcatcaaaaatcatcccatttagaagagt 436
||||||| |||||||||||||||||||||||
Sbjct: 31 atgcatctaaaatcatcccatttagaagagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 884
Length adjustment: 10
Effective length of query: 473
Effective length of database: 874
Effective search space: 413402
Effective search space used: 413402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
