Query= MSMg01no506_g21.b1 MSMg01no506_g21.b1 CHROMAT_FILE:
MSMg01no506_g21.b1 PHD_FILE: MSMg01no506_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:38 2005
(631 letters)
>mm_chr16_66424806_66425836
Length = 1031
Score = 1176 bits (608), Expect = 0.0
Identities = 626/632 (99%), Gaps = 2/632 (0%)
Strand = Plus / Plus
Query: 1 ttaagggatgcccactgtgattttctagatagagtctcttgctgggacacaggactcact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ttaagggatgcccactgtgattttctagatagagtctcttgctgggacacaggaatcact 260
Query: 61 gtttagactaagctgactggtcagggaccttcctgtttcttcttaccaagcattagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttagactaagctgactggtcagggaccttcctgtttcttcttaccaagcattagattt 320
Query: 121 acaaaagagtggcaccacactgagcatctccatatgtgctggagaaggagcttgggtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaaagagtggcaccacactgagcatctccatatgtgctggagaaggagcttgggtcct 380
Query: 181 catgctcatatggcaagccaaccttgtcatcctcttagtctgtatcctgcttgttatcta 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgctcatatggcaagccagccttgtcatcctcttagtctgtatcctgcttgttatcta 440
Query: 241 ggagttcacacttgcacttttatatttgaagattctgcacctaaggttgtcaagtttccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagttcacacttgcacttttatatttgaagattctgcacctaaggttgtcaagtttccc 500
Query: 301 agtatttagtatgggtcacctttatatttgcaaggggagcagttaaggactatgaacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtatttagtatgggtcacctttatatttgcaaggggagcagttaaggactatgaacatg 560
Query: 361 agctaggtgctacacattcaatacatacatcaggaatttatagcacagttatacagttaa 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 agctaggtgctacacattcaatacacacatcaggaatttatagcacagttatacagttaa 620
Query: 421 attgtgtccatatgactgagatgttcaggaccttaaagaatagaacctgcactatgcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgtgtccatatgactgagatgttcaggaccttaaagaatagaacctgcactatgcttg 680
Query: 481 ttattaaaatagtaaagaaatggctaataatatgtaaatacaagcctgacccacaagtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttattaaaatagtaaagaaatggctaataatatgtaaatacaagcctgacccacaagtgg 740
Query: 541 ttttagtattcatgtttctactgacttctcctcatgaaagtgtaaaagaatatttcntgt 600
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 741 ttttagtattcatgtttctactgacttctcctcatgaaagtgtaaaagagtatttc-tgt 799
Query: 601 aa-tttttgatttccaaagtttgcctttttct 631
|| |||||||||||||||||||||||||||||
Sbjct: 800 aaatttttgatttccaaagtttgcctttttct 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_g21.g1 MSMg01no506_g21.g1 CHROMAT_FILE:
MSMg01no506_g21.g1 PHD_FILE: MSMg01no506_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:38 2005
(505 letters)
>mm_chr16_66583855_66584759
Length = 905
Score = 868 bits (449), Expect = 0.0
Identities = 491/505 (97%)
Strand = Plus / Minus
Query: 1 ctgtccaatagatgagaacagtccagattctcagtgttcagtactgaaattttcccttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 705 ctgtccaatagatgagaacagtccagattctcagtgttcagtactgaaatttttgctccg 646
Query: 61 ttttagcttggggcgttgtgcaggtaatttacagccttgaaaactcaactatgtaaatga 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 645 ttttagcttggggcgttgtgcaggtaatttacagccttaaaaactcaactatgtaaatga 586
Query: 121 aggccatggaaatagggcactccagccaacccactggtgggtcgttgacagaggctcagc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 585 aggccatggaaatagggcactccagccaatccactggtgggtcgttgacagaggctcagc 526
Query: 181 ttgcaggatgagaagacagcatcattactgtgttttctcgaattctttgacttcacttag 240
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 525 ttgcaggatgagaagacagcatcattactgtgtcttctagaattctttgacttcacttag 466
Query: 241 actacattgtatatgtctctgtttggggaatttccagcccatattttggaaagtgaatga 300
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 actacattgtaaacgtctctgtttggggaatttccagcccatattttggaaagtgaatga 406
Query: 301 ttcagtctcttaatcatggacatgttgccaaagaaggtaatgtcacttaagatagttatc 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttcagtctcttaatcacggacatgttgccaaagaaggtaatgtcacttaagatagttatc 346
Query: 361 cttaaacacatatgggtgctttatattttaaatgaaaattactatgtgatgtgttaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cttaaacacatatgggtgctttatattttaaatgaaaattactatgtgatgtgttaaaaa 286
Query: 421 tcattgctcttgtttgaacccaacacactggcccaaacagttccacgtgtaagaggttta 480
||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 285 tcattactcttgtctgaacacaacacactggcccaaacagttctacgtgtaagaggttta 226
Query: 481 ttgggggcagggggtagtgatggga 505
|||||||||||||||||||||||||
Sbjct: 225 ttgggggcagggggtagtgatggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
