Query= MSMg01no507_i24.b1 MSMg01no507_i24.b1 CHROMAT_FILE:
MSMg01no507_i24.b1 PHD_FILE: MSMg01no507_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:09 2005
(490 letters)
>mm_chr16_75218642_75219529
Length = 888
Score = 870 bits (450), Expect = 0.0
Identities = 477/486 (98%), Gaps = 2/486 (0%)
Strand = Plus / Plus
Query: 5 gaattcataaggagtacagaaatataagtgaaaaaaagtaatgtagaagcccaaaagtca 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattcataaggagtacagaaatataagtg-aaaaaagtaatgtagaagcccaaaagtca 263
Query: 65 atgtcttagtactaagattacaaagagaaaaataaaataaaataaccagaatttttattg 124
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 264 atgtcttagtactaagattacaaagagaaaaa-aaaataaactaaccagaatttttattg 322
Query: 125 acactagaataaaaataaagatctgtttaatattctagcaatgtctttttaaaaactgtg 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 323 acactagaataaaaataaagatctgtttaatattctagcaatgtatttttaaaaattgtg 382
Query: 185 tggacaaaatcattattattggcagacagtgaattatagaaaagaagataaagataaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tggacaaaatcattattattggcagacagtgaattatagaaaagaagataaagataaaca 442
Query: 245 aaatggaacgtgggattaaaaagtttccttcaagggcgctgtctcctctgagaagattac 304
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 443 aaatggaacgtgggattaaaaagtttccttcaagggcactgtctcctctgagaagattat 502
Query: 305 tctttaggtgccatagatggtagatgggaggcgttcgcttacctcatctgaaataagaat 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 503 tctttaggtgccatagatggtagatgggaggcgtttgcttacctcatctgaaataagaat 562
Query: 365 ttaaggagggagcctgacatatgttaatttaagggtcttatattgatagattatatagga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttaaggagggagcctgacatatgttaatttaagggtcttatattgatagattatatagga 622
Query: 425 ttattctaaatgtctttgcatcttatttctcatgcagggatagtgaccatgactccaaat 484
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttactctaaatgtctttgcatcttatttctcatgcagggatagtgaccatgactccaaat 682
Query: 485 tttgtg 490
||||||
Sbjct: 683 tttgtg 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 888
Length adjustment: 10
Effective length of query: 480
Effective length of database: 878
Effective search space: 421440
Effective search space used: 421440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_i24.g1 MSMg01no507_i24.g1 CHROMAT_FILE:
MSMg01no507_i24.g1 PHD_FILE: MSMg01no507_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:09 2005
(165 letters)
>mm_chr16_75236112_75236676
Length = 565
Score = 269 bits (139), Expect = 7e-77
Identities = 157/163 (96%)
Strand = Plus / Minus
Query: 1 tcttaggactgagtccaatcatcaggtttgccatagaatgcctttacctgcagagccatc 60
|||||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 363 tcttaggactgagttcaatcatcaagcttgcgatagaatgcctttacctgcagagccatc 304
Query: 61 atgctggcccttcttggttggctggcttgcataggaattcctctgcagttttagcttgct 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 303 atgctggcccttcttggttggctggcttggataggaattcctctgcagttttagcttgct 244
Query: 121 ttctcctgttgactaaggttgatcatcttttattttcccaaag 163
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttctcttgttgactaaggttgatcatcttttattttcccaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
