Query= MSMg01no509_b04.b1 MSMg01no509_b04.b1 CHROMAT_FILE:
MSMg01no509_b04.b1 PHD_FILE: MSMg01no509_b04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:12 2005
(625 letters)
>mm_chr16_88010573_88011597
Length = 1025
Score = 1178 bits (609), Expect = 0.0
Identities = 621/625 (99%)
Strand = Plus / Minus
Query: 1 tctagattctaaatattgttgttcttcactgccaaggtacatgtttcctacggatcagcg 60
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 721 tctagattctaaatattgttgttcttcactgccaagatacatgtttcccacggatcagcg 662
Query: 61 atgttctgccactgtacatgctttgaaccagaagggctccatgagagtgttcaagaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgttctgccactgtacatgctttgaaccagaagggctccatgagagtgttcaagaaatc 602
Query: 121 ctgacttaaaagccttcagaagattataacttgtatacaggactcataagaggagtcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgacttaaaagccttcagaagattataacttgtatacaggactcataagaggagtcagg 542
Query: 181 gagaagggcttcagatatgtagcttgtgaactttttgttttctccaaaaccaagaaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagaagggcttcagatatgtagcttgtgaactttttgttttctccaaaaccaagaaccat 482
Query: 241 aactagcatacaagtacctccaataatgccctgacttagataatgtagagaaccgtttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aactagcatacaagtacctccaataatgccctgacttagataatgtagagaaccgtttca 422
Query: 301 aacattttctgctgcattgagcacaaaagtagattcactgcttaataaactacctaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacattttctgctgcattgagcacaaaagtagattcactgcttaataaactacctaacta 362
Query: 361 ccacatctatgtctctcacatggctaccttcctcttctcccacaaaagtcaaaacgatat 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 ccacatctatgtctctcacatggctaccttactcttctcccacaaaagtcaaaacgatat 302
Query: 421 atgcacgttcaggatttctggaaatataaagatcctaaagaggtaacagagaataagttc 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 atgcacgttcaggatttctggaaatataaagatcctaaagaggtagcagagaataagttc 242
Query: 481 taagaggcacagtttctctcactgtgaaatcttgatatgtagtgagtatgtgtgcgtgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taagaggcacagtttctctcactgtgaaatcttgatatgtagtgagtatgtgtgcgtgca 182
Query: 541 tgcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattatacaaacaaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattatacaaacaaaaga 122
Query: 601 gggacaaattcggtaaaaattggag 625
|||||||||||||||||||||||||
Sbjct: 121 gggacaaattcggtaaaaattggag 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 10
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_b04.g1 MSMg01no509_b04.g1 CHROMAT_FILE:
MSMg01no509_b04.g1 PHD_FILE: MSMg01no509_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:12 2005
(485 letters)
>mm_chr16_87955674_87956559
Length = 886
Score = 893 bits (462), Expect = 0.0
Identities = 480/486 (98%), Gaps = 1/486 (0%)
Strand = Plus / Plus
Query: 1 acggtaaaaaacatgggtctttcatcacacacatacatacacacacttcctaagctatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acggtaaaaaacatgggtctttcatcacacacatacatacacacacttcctaagctatac 260
Query: 61 agagaaacatgctgcatggtgtagctttgattatgagtttgcagagagtag-aagtctgg 119
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 agagaaacatgctgcatggtgtagctttgattatgagtttgcagagagtaataagtctgg 320
Query: 120 gtgcaaaggatggacggacttttgataatggtttgcctgtgagccccgagaagctggcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcaaaggatggacggacttttgataatggtttgcctgtgagccccgagaagctggcat 380
Query: 180 gggaagtgtgggcatgtcttcccctggttcccgagggacatgttagccttccccactgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaagtgtgggcatgtcttcccctggttcccgagggacatgttagccttccccactgcc 440
Query: 240 ttcaagactcaaccagccatctcaggaactgaggccgagacacctgaagagaaaaggtgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaagactcaaccagccatctcaggaactgaggccgagacacctgaagagaaaaggtgt 500
Query: 300 ggcaaaggttggagagataagaggtaaatagaaaatactttcatctattttgcttttgct 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcaaaggttgaagagataagaggtaaatagaaaatactttcatctattttgcttttgct 560
Query: 360 tttgatgggaaaacagcaattcaatgtgcctaatatcagtgtgcattgaaatagccatgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgatgggaaaacagcaattcaatgtgcctaatatcagtgtgcattgaaatagccatgg 620
Query: 420 agacaccacagtggttctgtctagattatcacctgtctgagcagaggaaaggcatttcct 479
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 621 agacaccacagtggttctgtctagtttatcacctgtctgagcggaggaaaggcatttact 680
Query: 480 taacag 485
||||||
Sbjct: 681 taacag 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 886
Length adjustment: 10
Effective length of query: 475
Effective length of database: 876
Effective search space: 416100
Effective search space used: 416100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
