Query= MSMg01no511_f10.b1 MSMg01no511_f10.b1 CHROMAT_FILE:
MSMg01no511_f10.b1 PHD_FILE: MSMg01no511_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:11 2005
(502 letters)
>mm_chr16_64258681_64259582
Length = 902
Score = 775 bits (401), Expect = 0.0
Identities = 416/423 (98%), Gaps = 4/423 (0%)
Strand = Plus / Minus
Query: 83 aggcgtcctgtggctttctggctagccagtccagccaattcatgagctttcacatcagtg 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aggcgtcctgtggctttctggctagccagtccagccaattcatgagctttcacatcagtg 843
Query: 143 agagactgtttctcaaaaatatagcaaacagtgattgaggaaggcatctgccattgatca 202
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 842 agagactgtttctcaaaaatatagcagacagtgattgaggaaggcatctgccattgatca 783
Query: 203 ctggcttctacattacacacagacacagacacagac----acacacacacacacacacac 258
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 782 ctggcttctacattacacacagacacagacacagacacagacacacacacacacacacac 723
Query: 259 acacacacacacacacacacagatatatatttataaactacacacaaacataggcatgca 318
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 722 acacacacacacacacacacagatatatatttatatactacacacaaacataggcatgca 663
Query: 319 catttataaaaaggcaaaagtacttgaagagataatcatgttcattggaaaataaaaaat 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 catttataaaaaggcaaaagtacttgaagagataatcatgttcattggaaaataaaaaat 603
Query: 379 aatggaaaataattcatggtaaaaaacagtctgttcttatataaaaagaaataggaacct 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatggaaaataattcatggtaaaaaacagtctgttcttatataaaaagaaataggaacct 543
Query: 439 agaagtctgttataaaaaagaggggggggatatttgaaataaatgaaaaataatagcagc 498
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 542 agaagtctgttataaaaaagaggggggagatatttgaaataaatgaaaaataatagcagc 483
Query: 499 tta 501
|||
Sbjct: 482 tta 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_f10.g1 MSMg01no511_f10.g1 CHROMAT_FILE:
MSMg01no511_f10.g1 PHD_FILE: MSMg01no511_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:11 2005
(475 letters)
>mm_chr16_64146457_64147331
Length = 875
Score = 888 bits (459), Expect = 0.0
Identities = 468/471 (99%)
Strand = Plus / Plus
Query: 1 tcagttttcctttgcaaagcattggggtacaggaaacatctgggaagttatttattatta 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagttttcctttgcaaaacattggggtacaggaaacatctgggaagttatttattatta 260
Query: 61 tgtacttcctgatactactttggaaaccttctaattttcctgtaatgatcaattctaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtacttcctgatactactttggaaaccttctaattttcctgtaatgatcaattctaaca 320
Query: 121 tttaaagttgaaacatttagattctataggccattctgcttggagaaatctcacacaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaaagttgaaacatttagattctataggccattctgcttggagaaatctcacacaaaa 380
Query: 181 gctgcaaaacttttttccccccaatatgcccagtgaactgttggctcacctaattgagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgcaaaacttttttccccccaatatgcccagtgaactgttggctcacctaattgagga 440
Query: 241 gagggcaggaataatctccagtgtctctttccattgacagccagcctcccatctgaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagggcaggaataatctccagtgtctctttccattgacagccagcctcccatctgaggca 500
Query: 301 tacttagagttttaaagaggggcatcctatgggttcttttcaaatgcctaagcaataagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacttagagttttaaagaggggcatcctatgggttcttttcaaatgcctaagcaataagt 560
Query: 361 ttcagtcctgatccataaccccgactgaagtgagaaaataaatgaaaaaaacatgtgctg 420
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcagtcctgatctgtaaccccgactgaagtgagaaaataaatgaaaaaaacatgtgctg 620
Query: 421 ctttctggattcttttactgaacagtgacctatacattcatggttttgtaa 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctttctggattcttttactgaacagtgacctatacattcatggttttgtaa 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
