Query= MSMg01no514_f01.b1 MSMg01no514_f01.b1 CHROMAT_FILE:
MSMg01no514_f01.b1 PHD_FILE: MSMg01no514_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:10 2005
(503 letters)
>mm_chr16_13069813_13070715
Length = 903
Score = 864 bits (447), Expect = 0.0
Identities = 466/477 (97%), Gaps = 9/477 (1%)
Strand = Plus / Minus
Query: 30 agagagaatacatggatttttcaccctccccgaatttattgatt---ggggggtggcata 86
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 903 agagagaatacatggatttttcaccctccccgaatttattgattgggggggggtggcata 844
Query: 87 ctgcttttatctttcatattgtttatgttttgcggatgagccctgggcatatagacttct 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ctgcttttatctttcatattgtttatgttttgcggatgagccctgggcatatagacttct 784
Query: 147 tttgttggttgtgtatctgatgtgaatacagcagacttggctggcacatagaatgtgcac 206
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tttgttggttg------tgatgtgaatacagcagacttggctggcacatagaatgtgcac 730
Query: 207 tgtgggcttgctaagctcagaggttgaggaaggtgcaggtagggcactgcgtgtgggagc 266
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 729 tgtgggcttgctaagctcagaggttgaggaaggtgcaggtagggcactgcatgtgggagc 670
Query: 267 cagagcatctgaggacggagtgcatacagatggggaagagataagaggatcctcggctga 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cagagcatctgaggacggagtgcatacagatggggaagagataagaggatcctcggctga 610
Query: 327 gctggatcacaggatgtgcagccgtgctgggcctggagggtgaatagggcatgtggtgca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctggatcacaggatgtgcagccgtgctgggcctggagggtgaatagggcatgtggtgca 550
Query: 387 cggcagaaaggctgtggaagagaagctggcttcagatcctacagttttatacttgtattt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cggcagaaaggctgtggaagagaagctggcttcagatcctacagttttatacttgtattt 490
Query: 447 catggagaactcttggctttaacaacttctgtgacaactatatctgcatctaattat 503
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 489 catggagaactcttggctttaacaacttctgtgacagctatatctgcatctaattat 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_f01.g1 MSMg01no514_f01.g1 CHROMAT_FILE:
MSMg01no514_f01.g1 PHD_FILE: MSMg01no514_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:10 2005
(508 letters)
>mm_chr16_12949160_12950066
Length = 907
Score = 967 bits (500), Expect = 0.0
Identities = 506/508 (99%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 1 cccagacaaggtcagaggagaaaccccactaatgaggggagtcttccattacacaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccagacaaggtcagaggagaaaccccactaatgaggggagtcttccattacacaccaag 260
Query: 61 tccagaggctatctggtcaatggtggacttcaaccttaattaacaggttttcccacaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagaggctatctggtcaatggtggacttcaaccttaattaacaggttttcccacaatg 320
Query: 121 atctttccccagagaagcacccaaccagtgactgctgagtccaaggagaagcacctgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctttccccagagaagcacccaaccagtgactgctgagtccaaggagaagcacctgagc 380
Query: 181 ccctgtgtccccaaaaggctatgctctgtactcattacataactccctgatggcagttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctgtgtccccaaaaggctatgctctgtactcattacataactccctgatggcagttac 440
Query: 241 aacctagtacctgcatgacctagtacctgcatgacatcccttactaactgctctcttcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacctagtacctgcatgacctagtacctgcatgacatcccttactaactgctctcttcct 500
Query: 301 ttcaaattatgtggcagtggtatttcatataaggcctcaaaaaggctcctaaactctttt 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 ttcaaattatgtggcagtggtatttcatataaggcctcaaaaag-ctcctaaactctttt 559
Query: 361 ctcaaagactttctttctgggagaccccaatcaaaagtcatactttacagcaggatcagt 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctcaaagactttctttctgggggaccccaatcaaaagtcatactttacagcaggatcagt 619
Query: 421 aaacctctctaaaaggccagcaagaaagtgcctgcagtgtatgaggggctgcagagatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaacctctctaaaaggccagcaagaaagtgcctgcagtgtatgaggggctgcagagatgg 679
Query: 481 ctcagcagctaggagtaccaatgctctc 508
||||||||||||||||||||||||||||
Sbjct: 680 ctcagcagctaggagtaccaatgctctc 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space: 446706
Effective search space used: 446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
