Query= MSMg01no514_p12.b1 MSMg01no514_p12.b1 CHROMAT_FILE:
MSMg01no514_p12.b1 PHD_FILE: MSMg01no514_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:04 2005
(604 letters)
>mm_chr16_77772083_77773087
Length = 1005
Score = 1096 bits (567), Expect = 0.0
Identities = 592/605 (97%), Gaps = 9/605 (1%)
Strand = Plus / Minus
Query: 1 aactactgttctctaaatttgtaacattctttccatctatttatcatctttgcttcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aactactgttctctaaatttgtaacattctttccatctatttatcatctttgcttcttaa 865
Query: 61 agaactttagagtgttgttcatcatttgattggctctacgtttgtttgtttgtttgtttg 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 864 agaactttagagtgttgttcatcatttgattggctctac--------gtttgtttgtttg 813
Query: 121 tttgttttaaacaaggtactctatatttggttctcctttagacacacaaggatagatttc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 812 tttgttttaaacaaggtactctatatttggttctcctttagacacacaagaatagatttc 753
Query: 181 tctttgggatgatcaaagggatgaattgttggcaagttatagagcacaattatgacataa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tctttgggatgttcaaagggatgaattgttggcaagttatagagcacaattatgacataa 693
Query: 241 acattttcctgtcccctgtgaggccaaatcctgaaagaattcattggttaagagcctgtt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acattttcctgttccctgtgaggccaaatcctgaaagaattcattggttaagagcctgtt 633
Query: 301 acttttactttgcatgtggttcattctttgaacttagttatccgcacagttatcagatgc 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 632 acttttactttgcatgtggttcattctttgaacttagttatccggacagttatcagatgc 573
Query: 361 aattctttcttgtggttcatgaataataaagctcaaatgtaaatgtcaagggaaagctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aattctttcttgtggttcatgaataataaagctcaaatgtaaatgtcaagggaaagctga 513
Query: 421 aaacgttaagatatatagttcaa-tttttttccaggaactagattgttggcatcttgctg 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 512 aaacgttaagatatatagttcaattttttttccaggaactagattgttggcatcttgctg 453
Query: 480 agatatccacagtttgaaaccacaactgaacgccctgtggtgattgccagccaacagcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agatatccacagtttgaaaccacaactgaacgccctgtggtgattgccagccaacagcaa 393
Query: 540 gtgctgacaggcttttctctgaatgtagatcaatgttcaccttattccaggcattggaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtgctgacaggcttttctctgaatgtagatcaatgttcaccttattccaggcattggaaa 333
Query: 600 agcag 604
|||||
Sbjct: 332 agcag 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1005
Length adjustment: 10
Effective length of query: 594
Effective length of database: 995
Effective search space: 591030
Effective search space used: 591030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_p12.g1 MSMg01no514_p12.g1 CHROMAT_FILE:
MSMg01no514_p12.g1 PHD_FILE: MSMg01no514_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:04 2005
(666 letters)
>mm_chr16_77681946_77683011
Length = 1066
Score = 1249 bits (646), Expect = 0.0
Identities = 661/666 (99%)
Strand = Plus / Plus
Query: 1 tggaaggcaaaacccttgattttgttatgtcaggaaactgtgtgtctccctagatattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaaggcaaaacccttgattttgttatgtcaggaaactgtgtgtctccctagatattca 260
Query: 61 tgtgttttgaaatactgtccataatgttcctacaaatgtttcttaaatttatatttttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgttttgaaatactgtccataatgttcctacaaatgtttcttaaatttatatttttgg 320
Query: 121 gaaattttggatgagattgtttttctttatgaattttgaaattgaatcagggaatttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaattttggatgagattgtttttctttatgaattttgaaattgaatcagggaatttgaa 380
Query: 181 ttgcagaatttcaccttccctaaaatgtagacatgaactggaaagtcagtaaccaatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcagaatttcaccttccctaaaatgtagacatgaactggaaagtcagtaaccaatgtg 440
Query: 241 tggtctgtttcagaattctaaacacaaaatttgatggaatctctgcaaactccggtgaat 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggctgtttcagaattctaaacacaaaatttgatggaatctctgcaaactccggtgaat 500
Query: 301 ctaccctgactattttagcagatagccagtctttctgttaacacgctttcccttccctat 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 501 ctaccctgactattttagcagatagccagtctttctgttaacatgctttcccttccttat 560
Query: 361 aactccttcctaaatcctgaagtccaccagagacctgactgccattaaaatgaatcttaa 420
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactccttcgtaaatcctgcagtccaccagagacctgactgccattaaaatgaatcttaa 620
Query: 421 ttacaattttgggttaagtaaggaaaaatatttttaaatgttttaaatcaatattcagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttacaattttgggttaagtaaggaaaaatatttttaaatgttttaaatcaatattcagca 680
Query: 481 ttcgattatacaaaattggagtgtcttaggttcattttataagtgctttcttagttttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcgattatacaaaattggagtgtcttaggttcattttataagtgctttcttagttttca 740
Query: 541 ttttaggaaatgtgttttttcctactaatttgtgtttaatgtatcatggatctttggatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttaggaaatgtgttttttcctactaatttgtgtttaatgtatcatggatctttggatt 800
Query: 601 ttactttgattacttttggtaaagaaatattatttttgtcccagtcaccctcaactcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttactttgattacttttggtaaagaaatattatttttgtcccagtcaccctcaactcctt 860
Query: 661 cctact 666
||||||
Sbjct: 861 cctact 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|