Query= MSMg01no516_g23.b1 MSMg01no516_g23.b1 CHROMAT_FILE:
MSMg01no516_g23.b1 PHD_FILE: MSMg01no516_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:10 2005
(520 letters)
>mm_chr16_73918709_73919628
Length = 920
Score = 932 bits (482), Expect = 0.0
Identities = 506/517 (97%), Gaps = 8/517 (1%)
Strand = Plus / Minus
Query: 5 gaattcactggattatctatacactaagttttagattattctcataaaacactatggatt 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaattaactggattatctatacactaagttttagattattctcataaaacactatggatt 585
Query: 65 aaaataagctaaggaaagagatgtggggcaaacttctgaagaatttcaaaaacagagatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaaataagctaaggaaagagatgtggggcaaacttctgaagaatttcaaaaacagagatc 525
Query: 125 tcctccatttcctcctattggagctctgggtagcttggtttccctgcattagcaagatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcctccatttcctcctattggagctctgggtagcttggtttccctgcattagcaagatgc 465
Query: 185 agggatgataaccaatccattgacatacatgggaacagagctagagtcatactcttagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agggatgataaccaatccattgacatacatgggaacagagctagagtcatactcttagag 405
Query: 245 ctattaaggttgaatacattcatgactgacctcaatagtcagcccattgacagccgacac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctattaaggttgaatacattcatgactgacctcaatagtcagcccattgacagccgacac 345
Query: 305 tatgattttgtgactaaaagccctttgaagatttgtcctgttaaatattgtgtggaccag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tatgattttgtgactaaaagccctttgaagatttgtcctgttaaatattgtgtggaccag 285
Query: 365 ggcttccaattctatagacactgtacca-gaaagaacatactacctccaggttacaaagg 423
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 284 ggcttccaattctatagacactgtaccatg-aagaacatactacctccaggttacaaagg 226
Query: 424 anaatatctacctttttcattttcttttttctttttttttcttttttccttttttctttt 483
| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 225 aaaatatctacctttttcattttcttttttctttttttt-ctttttttcttttttctttt 167
Query: 484 cttttcttttctttttctttctttcttttcttttctt 520
|||||||||| ||||||||||||||||||||||
Sbjct: 166 cttttctttt-----tctttctttcttttcttttctt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_g23.g1 MSMg01no516_g23.g1 CHROMAT_FILE:
MSMg01no516_g23.g1 PHD_FILE: MSMg01no516_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:10 2005
(450 letters)
>mm_chr16_73792769_73793618
Length = 850
Score = 862 bits (446), Expect = 0.0
Identities = 449/450 (99%)
Strand = Plus / Plus
Query: 1 atttttgttgttgttgtgctgtagacttgactaatgacaccaacaatatacatagtgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttttgttgttgttgtgctgtagacttgactaatgacaccaacaatatacatagtgtgt 260
Query: 61 taagagaatgttctttattaaagatctaccacattagatataaacctatcattaaaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagagaatgttctttattaaagatctaccacattagatataaacctatcattaaaacac 320
Query: 121 cttcacagaaacagctggaatagttggccaacattttgacatcatgcccagaaaacctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcacagaaacagctggaatagttggccaacattttgacatcatgcccagaaaacctga 380
Query: 181 tgtgttaaaattacctgtcagatcaagtatgtttttgtttatattttaagaagctgggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgttaaaattacctgtcagatcaagtatgtttttgtttatattttaagaagctgggat 440
Query: 241 tgggtatttaaacatgatgagtaagaatgtgtgtcatagttctgtctatccatataaaca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgggtatttaaacatgatgagtaagaatgtgtgtcatagttctgtctatccatataaaca 500
Query: 301 tactttcctttcatcaaggctcagtctaacttcagagatgttagaaaggcaattttcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactttcctttcatcaaggctcagtctaacttcagagatgttagaaaggcaattttcaat 560
Query: 361 tatgttcaaattatagaaattgcatttaccattctgagtacagtgaaaccacaagctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgttcaaattatagaaattgcatttaccattctgagtacagtgaaaccacaagctatt 620
Query: 421 ttttccttttcatgtctctttatttttcaa 450
||||||||||||||||||||||||||||||
Sbjct: 621 ttttccttttcatgtctctttatttttcaa 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
