Query= MSMg01no518_c20.b1 MSMg01no518_c20.b1 CHROMAT_FILE:
MSMg01no518_c20.b1 PHD_FILE: MSMg01no518_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:30 2005
(729 letters)
>mm_chr16_72147510_72148639
Length = 1130
Score = 1381 bits (714), Expect = 0.0
Identities = 723/726 (99%), Gaps = 1/726 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaataacttctatttggggaatgtatttaattgtccttttctaattaattctaa 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 930 gaattcaaataacttctatttggggaatgtatttaattgtcgttttctaattaattctaa 871
Query: 65 tatatcttccttagttaggtatgtatgctgatagcttgctaaatccaggcataagaatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tatatcttccttagttaggtatgtatgctgatagcttgctaaatccaggcataagaatat 811
Query: 125 atacctcttattgctttataaacagttaagacatttttatttatgtcactattgaaatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 atacctcttattgctttataaacagttaagacatttttatttatgtcactattgaaatat 751
Query: 185 tgcacttattaacttaaaggaaagtggaaggaattacttgaattagaaactactcacttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgcacttattaacttaaaggaaagtggaaggaattacttgaattagaaactactcacttt 691
Query: 245 caaagatatggatgtttgatctttaaaatcaacccctccccatttgttccctcagagata 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 690 caaagatatggatgtttgatctttaaaatcaccccctccccatttgttccctcagagata 631
Query: 305 tgctaatgattccaggtccagggctttaaaaacataataaagccagaaaatcagcaagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgctaatgattccaggtccagggctttaaaaacataataaagccagaaaatcagcaagat 571
Query: 365 ctgttcttcacttcatgccacattaatgagggggcatcagcctaaagatgaggggtcctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctgttcttcacttcatgccacattaatgagggggcatcagcctaaagatgaggggtcctt 511
Query: 425 tcagtagattatctaacctccttatcctgaacccagagctcatagcagaggcagttatca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcagtagattatctaacctccttatcctgaacccagagctcatagcagaggcagttatca 451
Query: 485 aaatgactactgctctgcagggggccctttgaaaagctaagagcatatttcttttgacag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aaatgactactgctctgcagggggccctttgaaaagctaagagcatatttcttttgacag 391
Query: 545 acaaattactttgaaataattttgaactctatgatcttgacaaaaa-atagtcattttta 603
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 390 acaaattactttgaaataattttgaactctatgatcttgacaaaaatatagtcattttta 331
Query: 604 gctgtgtggattacattcataggtacccctgtttccttgagtgaagaagctgccttaaaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gctgtgtggattacattcataggtacccctgtttccttgagtgaagaagctgccttaaaa 271
Query: 664 taagctcctgtgaccaatatctttgctacatctttaattgataagcaacctctctcattt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taagctcctgtgaccaatatctttgctacatctttaattgataagcaacctctctcattt 211
Query: 724 ataatg 729
||||||
Sbjct: 210 ataatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 729
Length of database: 1130
Length adjustment: 10
Effective length of query: 719
Effective length of database: 1120
Effective search space: 805280
Effective search space used: 805280
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no518_c20.g1 MSMg01no518_c20.g1 CHROMAT_FILE:
MSMg01no518_c20.g1 PHD_FILE: MSMg01no518_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:30 2005
(689 letters)
>mm_chr16_71972390_71973478
Length = 1089
Score = 1332 bits (689), Expect = 0.0
Identities = 689/689 (100%)
Strand = Plus / Plus
Query: 1 tgcctgcctctgcctcccaagtgctggaattaaaggcatgtgccaccactgcctggattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctgcctctgcctcccaagtgctggaattaaaggcatgtgccaccactgcctggattt 260
Query: 61 tgtcaggatttttacgacagtaatagacgagtaaactagggcaaggaaatttatgaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcaggatttttacgacagtaatagacgagtaaactagggcaaggaaatttatgaagtt 320
Query: 121 gaaatgttatataacatgatattatacttagcataatgtttctatacgcctaaaattact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatgttatataacatgatattatacttagcataatgtttctatacgcctaaaattact 380
Query: 181 catttctcatataagaaagtattatgtttaaagacataatttctgccattaataacatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttctcatataagaaagtattatgtttaaagacataatttctgccattaataacatgc 440
Query: 241 tcaaatataatgattgagatgtattaaaatattgtagtgaaacacactcatctatattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaatataatgattgagatgtattaaaatattgtagtgaaacacactcatctatattct 500
Query: 301 aactgaaagaaataaatacataaacatttaaaataaagtaatatatgcaggtatcttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactgaaagaaataaatacataaacatttaaaataaagtaatatatgcaggtatcttgtg 560
Query: 361 gttgagtcattgaacatttctatttttaacccacaatatttgtgtttgtattatctgcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttgagtcattgaacatttctatttttaacccacaatatttgtgtttgtattatctgcac 620
Query: 421 tttttaatgtagtgtttaaggagtagaaatgttacaagggtagttcaaaaaacattggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttttaatgtagtgtttaaggagtagaaatgttacaagggtagttcaaaaaacattggta 680
Query: 481 ttactggaattcactagtgtagtggcccaaatatttcataggatcatggagaaatagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttactggaattcactagtgtagtggcccaaatatttcataggatcatggagaaatagctg 740
Query: 541 aggaatcattctttcagtggagacaggttgaaatcaattcaccataggtagttcaaaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggaatcattctttcagtggagacaggttgaaatcaattcaccataggtagttcaaaacc 800
Query: 601 atccataactccatattcaagattcacatgatatacagacatgcatttagcaaaacattc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atccataactccatattcaagattcacatgatatacagacatgcatttagcaaaacattc 860
Query: 661 acagtcataaaataacatagaatatctaa 689
|||||||||||||||||||||||||||||
Sbjct: 861 acagtcataaaataacatagaatatctaa 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
